Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 5e-50
 Identities = 108/345 (31%), Positives = 191/345 (55%), Gaps = 4/345 (1%)

Query: 332 LAILAVWFGLRRWIGRA----LNNITRHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVI 387
           L +  V  GL   I RA    L+ I   + ++ Q  L  ++ ++G  +   VA ++N  I
Sbjct: 192 LIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINNSI 251

Query: 388 VSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIA 447
            + H++L    ++  ++ + A     SAE+++Q++ +Q   L  +A  +NQ+ A++ ++A
Sbjct: 252 AAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVA 311

Query: 448 GVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVD 507
           G + D+  D+++A++ +  G K +  +   ++AL   L V    +++L + V  I E+  
Sbjct: 312 GHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTS 371

Query: 508 MISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVT 567
           +ISGI++ TNLLALNAAIEAARAG+QGRGFAVVADEVR LAS T   T  I+ M+N L  
Sbjct: 372 VISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQ 431

Query: 568 AASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATAD 627
            A  +  A+ +S+     ++ ++E   S    I   + H+  +  QI  A EEQ     +
Sbjct: 432 LAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEE 491

Query: 628 VNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
           +N+ V+ I++   E  +    + E +E++A+++      L  ++L
Sbjct: 492 MNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536