Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 1e-35
 Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 7/306 (2%)

Query: 364 LNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLA 423
           L  R+ +    +  +VA   N  +   H  +  +  +  T+   A+       Q++  + 
Sbjct: 256 LTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMD 315

Query: 424 AQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALET 483
                   + A + ++ A+ RE+A  ++ +      A    A   K +      +  L  
Sbjct: 316 GHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVN 375

Query: 484 TLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADE 543
            +    AA+ +L+Q+   I +++ +I  IA+ TNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 376 EVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 435

Query: 544 VRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERA 603
           VR LAS T   T  I +M+N L    SK+ Q+++ S++        S ++K +   I +A
Sbjct: 436 VRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKA 495

Query: 604 VAHIRTRVEQITQATEEQKRATADVN-------KAVAQISEQGQETKRQLDAMLESAEQV 656
           V+ I     Q   A E+Q     D+N       + V ++SE  ++T+    ++  S +Q+
Sbjct: 496 VSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQM 555

Query: 657 AEIAGH 662
             + GH
Sbjct: 556 GTLVGH 561