Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  137 bits (345), Expect = 2e-36
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 12/362 (3%)

Query: 314 STISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHKLNHRLDLVGP 373
           S I+A+ +   +   LL L I  +   L + +GRA+ +I      LT+     RL +   
Sbjct: 277 SAITAMVVVVVVIILLLGLLIRVLMQPLHQ-MGRAMRDIADGEGDLTK-----RLAITSQ 330

Query: 374 QDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALL--- 430
            +F  +A   N+ +   H S+  V     T  Q  E++    + SN S+   +Q      
Sbjct: 331 DEFGELAESFNRFVERIHTSIREVA---STAAQLGEVATRVVKVSNASMGNSDQQANRTE 387

Query: 431 TMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDA 490
           ++AA IN+L A+ +EIA  +  +   S +A+  ++ G  V++Q  + +  L   ++ +  
Sbjct: 388 SVAAAINELGAAAQEIAQNAARTSQQSSDASGLASDGQNVVQQTIKAMNELSGKISESCV 447

Query: 491 AMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASD 550
            +  LN +  +I +++++I+ I+  TNLLALNAAIEAARAGE GRGFAVVADEVR LA  
Sbjct: 448 NIESLNGKTANIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHR 507

Query: 551 TSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTR 610
           T      ++ M+ EL   A  +   + ES+++   ++  +         + R +  I   
Sbjct: 508 TQDSAQQVQTMIEELQVGARDAVTNMTESQRQSEDSVGIANLAGERLGSVTRRIEEINGM 567

Query: 611 VEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKY 670
            + +  ATEEQ      +N  +  I+   Q     L   LE+   + E A   Q ++  +
Sbjct: 568 NQSVAAATEEQTSVVESINVDITHINTLNQLGVDNLRQTLEACNSLEEQAARLQQLVGSF 627

Query: 671 EL 672
            +
Sbjct: 628 RI 629