Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  139 bits (350), Expect = 3e-37
 Identities = 132/487 (27%), Positives = 226/487 (46%), Gaps = 71/487 (14%)

Query: 179 NPEAMDAANRFTASASAMESAFLLLFIEEEMSAAQKYRQELKNR--VAGLELAFDDFKEW 236
           +P ++DA N    +A A             ++ A+K+     N   +AG + A D   E 
Sbjct: 79  DPASLDAMNTLLTNAGA------------SLNEAEKHFNNYVNSEAIAGKDPALDAQAE- 125

Query: 237 YPEIKDYASLTAPYEMVLAGFQAQAVIEQIINKLED---AQQQNKDFASAAEVAQQLVTQ 293
                  AS    Y+          V++Q I+ L+    A   N D   A +  +Q+   
Sbjct: 126 -------ASFKQMYD----------VLQQSIHYLKADNYAAYGNLDAQKAQDDMEQVY-- 166

Query: 294 LNQWSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNIT 353
            +QW +   Q I     +  S+ + +  T  I   ++++ +  +W GL+R + R L  I 
Sbjct: 167 -DQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQRVLLRPLQRIM 225

Query: 354 RHLAQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTA-ELSH 412
            H+  +    L H ++  G  +   +AA L  +  S   +++ V  N +++Y  A E+S 
Sbjct: 226 AHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISA 285

Query: 413 GSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIE 472
           GS++ S+++   Q  AL   AA++ QL A++R+    +  +   +  A+E + +G +V++
Sbjct: 286 GSSDLSSRT-EQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVD 344

Query: 473 QNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGE 532
                         +ND A  E ++++  I  ++D   GIA  TN+LALNAA+EAARAGE
Sbjct: 345 N---------VVSTMNDIA--ESSEKIVDITSVID---GIAFQTNILALNAAVEAARAGE 390

Query: 533 QGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEE 592
           QGRGFAVVA EVR LAS +++              AA + +  ++ S   + T      E
Sbjct: 391 QGRGFAVVAGEVRTLASRSAQ--------------AAKEIKVLIENSVSRIDTGSTQVRE 436

Query: 593 VKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLES 652
              T  +I  AV  +   + +I  A++EQ +    V +AV   SE    T++    + ES
Sbjct: 437 AGETMKEIVNAVTRVTDIMGEIASASDEQSKGIEQVAQAV---SEMDSVTQQNASLVEES 493

Query: 653 AEQVAEI 659
           A   A +
Sbjct: 494 AAAAAAL 500