Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., Aerotaxis receptor from Alteromonas macleodii MIT1002

 Score =  152 bits (384), Expect = 4e-41
 Identities = 114/374 (30%), Positives = 179/374 (47%), Gaps = 27/374 (7%)

Query: 307 QGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRA----LNNITRHLAQLTQH 362
           +GK  V+           ++ TLL+ A+L +          A    L  I   +AQ  + 
Sbjct: 135 EGKSAVSPMSRLAQNLMHLAPTLLISAVLVIALAFTHGAAAAGIALLGAIVLMIAQEAKT 194

Query: 363 KLNHRLDL-VGPQDFQNVAAQLNQVIVSTHESLALVTRNCET----------------LY 405
           + +    L + P+ + N            H S A +   CE                 L 
Sbjct: 195 RKDWGALLSLSPESYANETVAQTYFPDPPHISQAKLALGCELARNRTALTRIKDASAGLE 254

Query: 406 QTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSA 465
             A  +H  AE ++ ++  QNQA   +A+ + Q+  +I+E+A     +   +  AA +  
Sbjct: 255 SIANTTHEQAESTSAAVVQQNQATQQIASAVTQMSQAIQEVAERVESNAKSARTAASNVE 314

Query: 466 QGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAI 525
            G +  EQ  Q + AL   +      ++EL Q  + I E  ++IS IA+ TNLLALNAAI
Sbjct: 315 TGNQKAEQAMQAIVALREAVESISTTVTELAQSTSDIGEAANIISTIAEQTNLLALNAAI 374

Query: 526 EAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVT 585
           EAARAGEQGRGFAVVADEVR LAS T + T  I +++NEL   A +S +AV  S + + +
Sbjct: 375 EAARAGEQGRGFAVVADEVRTLASKTRESTDKIHNIINEL---AERSDRAVRVSTEGLAS 431

Query: 586 ALQSS---EEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQET 642
           A   S   EE +    +I  AV  I     +++ A EEQ      +N+ + ++++   ET
Sbjct: 432 AEHGSAIVEETRGALFEINNAVKGIADATVEMSSAVEEQSTVAEHINQQLVEVADGASET 491

Query: 643 KRQLDAMLESAEQV 656
           +R  +A L ++  +
Sbjct: 492 QRSSEASLAASHDL 505