Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  161 bits (408), Expect = 8e-44
 Identities = 157/677 (23%), Positives = 293/677 (43%), Gaps = 23/677 (3%)

Query: 10  TQTLGAVFLCITILMISLSVTSLRGIERVGAQFNQLSEQALPFALNNAALTQNFLEQVKY 69
           T+ +G  F+ I+ L+I +SV SL  +  +G+   ++++ ALP    + AL  +FL   + 
Sbjct: 7   TRVIGG-FVAISALLIVISVVSLYNLNSIGSATEEVNDVALPTVAGSNALKASFLNMGRL 65

Query: 70  LGYGTRSQSEQELNQVLNEWQKLDAQAGDEITRLQQNVQLLSSAEAVQQAEQLQREILH- 128
                 S  E++LN + ++    ++      +  ++  Q +++   ++      RE    
Sbjct: 66  T---FESYIEEDLNGLKDKRASFNSAKDTFESEYKKLAQAVNNEPELKSTLNTVRESYEA 122

Query: 129 FQQLAQSILKLQQLQLSKTAQISEQAKQFRYGLSSIGPEMGRIASFLAVDNPEAMDAANR 188
           +    +++ K  Q+ L     I ++              +     F  +D  +      R
Sbjct: 123 YITNVEAMYKNHQMYLDIRNTIQDRLGDAEDNADDASTYL---LDFSDLDAVQRDPNLRR 179

Query: 189 FTASASAMESAFLLLFI-------EEEMSAAQKYRQELKNRVAGLELAFDDFKEWYPEIK 241
                S +E++ L L          E +  +Q    E+   V  +     D  +      
Sbjct: 180 AAEIGSQLETSLLSLLTVSYEYIKTETLVRSQTLGNEVDLVVEKVVTQLSDMMQTAGGRD 239

Query: 242 DYASLTAPYEMVLAGFQA----QAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQW 297
           D  +L    ++V     A      V++  +++LE      K   ++     Q V  L   
Sbjct: 240 DSGTLDDINDLVNNAINAIKANDGVVQLHVDRLERRNDAEKALNASDSNIAQAVVALENL 299

Query: 298 STLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILA-VWFGLRRWIGRALNNITRHL 356
             LA +     + +V   I A   T  I   ++ +A+ A + +   R I R L  +   L
Sbjct: 300 LNLADKKASHVESQVNGAI-ATGNTFVIVVVIISIAVAAFIGYVTVRAITRPLYRVNELL 358

Query: 357 AQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAE 416
              +   L HRLD     +F  +A   N +I +  E +  +    E L   +E +     
Sbjct: 359 TVASSGDLTHRLDDSAQDEFGLLARNCNTLIGNLKELITAINVRAEQLAAASEQTSAVTA 418

Query: 417 QSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIE-QNQ 475
           Q+  S+  Q   +  +A    ++ ++ + +   + D+ +  +  A+  A+ V+ I  +N+
Sbjct: 419 QTTHSIQDQKSQIGQVATATTEMHSTSQLVVQNAEDTLSQ-IRHADAEAENVRQISLENK 477

Query: 476 QRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGR 535
             ++ L   +      +++L+Q   SI  ++D+I G+AD TNLLALNAAIEAARAGEQGR
Sbjct: 478 NTIEILSRDVQEAADVINKLHQDSASIGGILDVIRGVADQTNLLALNAAIEAARAGEQGR 537

Query: 536 GFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKS 595
           GFAVVADEVR LAS T + T  I  M+  L   A K+   +++ +++    +  +E+   
Sbjct: 538 GFAVVADEVRTLASRTQESTQEINAMIEVLQAGAEKAVSVMNQGKEQTAACVAQTEKATQ 597

Query: 596 TFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQ 655
               I  AV        QI Q+  EQ   + ++++ +  I    +ET        ES+ +
Sbjct: 598 ALDIISDAVHKAHDVSSQIEQSAREQNTVSQEISEKLETIVGIAEETTAGAQQTSESSHE 657

Query: 656 VAEIAGHQQAMLHKYEL 672
           VA +A   Q  + ++++
Sbjct: 658 VARLAEELQQSIRQFKV 674