Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  152 bits (385), Expect = 3e-41
 Identities = 109/469 (23%), Positives = 220/469 (46%), Gaps = 10/469 (2%)

Query: 206 EEEMSAAQKYRQELKNRVAGLELAFDDFKEWYPEIKDYASLTAPYEMVLAGFQAQAVIEQ 265
           E+ ++ AQ+  +E K+   GL        E+  EI   +S    Y  V     A  V + 
Sbjct: 79  EDTLTMAQELAEEAKS---GLNQIASISPEFRSEISRISSGFDNYFDV-----AYDVSQS 130

Query: 266 IINKLEDAQQQNKDFASAAEVAQQLVTQLNQWSTLAQQHIVQGKQEVTSTISAVTLTQQI 325
           ++N   D  +  +  A   +     +  ++Q+    Q    +  +   S  +++  T  I
Sbjct: 131 MVNGTADFSRLGELSAQMNQSYDGAIAAMSQFRDAQQAAFEEAFKNTDSANTSLISTGVI 190

Query: 326 SGTLLVLAILAVWFGLRRWIGRALNNITRHLAQLTQHK--LNHRLDLVGPQDFQNVAAQL 383
              ++ + +      + R I ++++++ R L  + Q    L  R++     +   +    
Sbjct: 191 LAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQENGDLTVRIETKSEDEIGELVYWF 250

Query: 384 NQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASI 443
           NQ +      +  V      L   A+   G  E++ +++  Q ++       ++ +  S+
Sbjct: 251 NQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQRTIDVQQKSATNAKRAVDTMSGSV 310

Query: 444 REIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIR 503
             +A  +  + +D+ EA   + +G ++++Q    +Q L   +      ++ L      + 
Sbjct: 311 DGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQLAENVRETADVIARLESDSNKVG 370

Query: 504 EMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMN 563
            ++D+I GIA+ TNLLALNAAIEAARAGEQGRGFAVVADEVR LAS T + T  I+  + 
Sbjct: 371 SVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQQSTEEIQSTIE 430

Query: 564 ELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKR 623
           +L  AA  + + +    ++  ++++++ +  S+   I   +  I    EQI   TE+Q+ 
Sbjct: 431 QLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLETITSTIGRINQMNEQIAHNTEDQRT 490

Query: 624 ATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIAGHQQAMLHKYEL 672
              D+ + V +I E+ ++T  +   +     ++A++A H +++  ++ +
Sbjct: 491 VAVDIVRHVDEIHERTEQTASRSGELGSMCNELADLAQHLESIAKQFRV 539