Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Spermidine/putrescine import ATP-binding protein PotA from Xanthobacter sp. DMC5

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 9/195 (4%)

Query: 10  LSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVLGRKPWWQ 69
           ++ RF D    H   + I   + + L G +G GKTTLL ++AG LE   G +        
Sbjct: 35  VTKRFGDATALHEAWLKIADGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEIFVGG---- 90

Query: 70  RLFLTSAT--SEVVYLHQSPYLFDD-TVYQNVVYGIRFSGLSAHEKRAQVITALRMVGLE 126
           RL   +A    E+  + Q+  LF    V +NV YG+R  G++  E   +V  AL +V L+
Sbjct: 91  RLMTETAPYDREIGVVFQNYALFPHMNVAKNVGYGLRMRGVAKSEIETRVAEALALVKLD 150

Query: 127 TLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDLLER-- 184
              +     LSGG++QRVA+ARA +++P +LL+DEP ++LD+     + +  +++  R  
Sbjct: 151 GFGERKPRQLSGGQQQRVALARALVIRPKVLLLDEPFSALDKNLRGAMQVELKEIQRRLG 210

Query: 185 GSSLVITSHQTNALT 199
            +++ +T  Q+ AL+
Sbjct: 211 VTTIFVTHDQSEALS 225