Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score = 99.8 bits (247), Expect = 7e-26
 Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 9/200 (4%)

Query: 5   LTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVL-- 62
           LT  +L  R+   V      +++   + I L G +G GKTT+L+++AGL+EP+ GR+L  
Sbjct: 4   LTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRILVD 63

Query: 63  GRKPWWQRLFLTSATSEVVYLHQSPYLFDD-TVYQNVVYGIRFSGLSAHEKRAQVITALR 121
           GR        L +    +  + QS  LF   +V++NV +G+R  G+   E + +V  AL 
Sbjct: 64  GR----DITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALA 119

Query: 122 MVGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDL 181
            V L  L D     LSGG++QRVA+AR+   +PSILL DEP ++LD    + + I  + L
Sbjct: 120 SVRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRL 179

Query: 182 LERG--SSLVITSHQTNALT 199
                 ++L +T  Q  A++
Sbjct: 180 QREVGITTLFVTHDQGEAMS 199