Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 19/191 (9%)

Query: 18  VLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVLGRKPWWQRLFLTSAT 77
           V FH+      P +  +L G +G GK+TLLK++ G+  PS G++     W+    +T   
Sbjct: 21  VTFHMQ-----PGEMAFLTGHSGAGKSTLLKLICGIERPSAGKI-----WFSGHDITRLK 70

Query: 78  S-EVVYLHQS--------PYLFDDTVYQNVVYGIRFSGLSAHEKRAQVITALRMVGLETL 128
           + EV +L +           L D TVY NV   +  +G S  + R +V  AL  VGL   
Sbjct: 71  NREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDK 130

Query: 129 ADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDLLERGSSL 188
           A      LSGGE+QRV +ARA + KP++LL DEP+ +LD    E ++ +  +    G ++
Sbjct: 131 AKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTV 190

Query: 189 VITSHQTNALT 199
           ++ +H  N ++
Sbjct: 191 LMATHDINLIS 201