Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 65/195 (33%), Positives = 107/195 (54%), Gaps = 9/195 (4%)

Query: 8   QQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVL--GRK 65
           + ++ RF    +     + I     + L G +G GKTT+L+++AGL +PS G++   G  
Sbjct: 10  RNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGED 69

Query: 66  PWWQRLFLTSATSEVVYLHQSPYLFDD-TVYQNVVYGIRFSGLSAHEKRAQVITALRMVG 124
              + +       ++  + QS  LF   ++ +NV YG++  G+   E +A+V  AL MV 
Sbjct: 70  VTHRSI----QQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVD 125

Query: 125 LETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDLLER 184
           LE   D  +  +SGG++QRVA+ARA ILKP +LL DEP ++LD      +    R+L ++
Sbjct: 126 LEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQ 185

Query: 185 G--SSLVITSHQTNA 197
              +SL +T  Q+ A
Sbjct: 186 FDITSLYVTHDQSEA 200