Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., Spermidine/putrescine import ATP-binding protein PotA from Azospirillum sp. SherDot2

 Score =  100 bits (248), Expect = 5e-26
 Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 5/198 (2%)

Query: 5   LTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVLGR 64
           L+ Q L+ R+ D V     ++ +   + + L G +G GKTTLL +LAGL+ P  G V  R
Sbjct: 6   LSVQGLAKRYGDFVALAPTDLVVADGEFLTLLGPSGSGKTTLLSLLAGLVPPDEGSV--R 63

Query: 65  KPWWQRLFLTSATSEVVYLHQSPYLFDD-TVYQNVVYGIRFSGLSAHEKRAQVITALRMV 123
                  +      ++  + Q+  LF   T+ +N+ + ++   + A E + + + AL MV
Sbjct: 64  IGSQDVTYAPPYERDIGVVFQNYALFPHMTIEENIAFPLKMRKVGATEAKRRALEALEMV 123

Query: 124 GLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDL-L 182
            L  +A  +   LSGG++QRVA+AR  + KPSI+LMDEP  +LD++  E + +  + L  
Sbjct: 124 HLPHIAGRYPRELSGGQQQRVALARCMVYKPSIILMDEPLGALDKKLREHMQLEIKRLHR 183

Query: 183 ERGSSLVITSH-QTNALT 199
           E G+++V  +H Q  A+T
Sbjct: 184 ELGTTVVYVTHDQEEAMT 201