Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 28  SFSVSLTAIALVLIPSVVLSFVLAYTNF--RGKWTLLSLINTLQAVPTVVIGLLLYMLLS 85
           S SV+ T  A+V+  + + +F L  T    +G W  +SL+  L   P+++  + L  L  
Sbjct: 84  SLSVAFTVAAIVVPLAYLFAFALQRTLIPAKGLWRGISLLPLL--APSMLPAIALVYLFG 141

Query: 86  RAGPLGDW--QMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSLETSMTLGASVPRL 143
             G L       ++    ++LG+A+  FP  + ++  AL   D R  + + ++GA   R 
Sbjct: 142 NQGLLRGLLSDNIYGFWGIVLGEAIYTFPHALMILLSALSLADARLFDAASSMGAGSWRA 201

Query: 144 FATLVWEA-RFPLMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIPTAISLESNKGAFAQ 202
           F ++ W A R  + AA    F+  +T+ G  ++VGG+   L      A+     +  F +
Sbjct: 202 FTSITWPASRQAVFAAFCLVFTLTITDFGVPVVVGGDYQVLALEAYKAV---VGQQQFGR 258

Query: 203 GVALGMVLLALAL 215
           G  +GMVLL  AL
Sbjct: 259 GALIGMVLLLPAL 271