Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  295 bits (754), Expect = 3e-84
 Identities = 175/459 (38%), Positives = 263/459 (57%), Gaps = 6/459 (1%)

Query: 17  SVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIE 76
           +VL++DDE  ++ +L   L +   +VD   ++ EA     E  YDL   D+ LP  +G E
Sbjct: 5   TVLVIDDERDIRELLTITLGRMDLQVDAVGTVAEARRALAERSYDLCFTDMRLPDGTGHE 64

Query: 77  WEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLN 136
             E          V  +T + +++ A++ALK GA DF+ KP ++ QML+ + R   +   
Sbjct: 65  IIELIAAEHPDMPVAMITAYGNVDAAVNALKAGAFDFVSKPVDI-QMLRGLVRTALRLAE 123

Query: 137 ERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVARGI 196
           ER   A     +   ++++IG S   + ++  I + A ++A V I GESG GKELVAR I
Sbjct: 124 ERRSGAAAA--KTGDSSRLIGDSSAMQQVRATIAKLARNQAPVYIAGESGVGKELVARLI 181

Query: 197 HEASGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLDEI 255
           HE   R  GPFVP+NCGAI  EL+ESE FGH  G+FTGA   +EGLF+ A GGTLFLDE+
Sbjct: 182 HEQGPRASGPFVPVNCGAIPSELMESEFFGHRKGSFTGASTDKEGLFQAAQGGTLFLDEV 241

Query: 256 GEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYYRL 315
            E+PL MQ  LLR ++++AVRP+G   E+ VD R+++AT++NL Q VE G+FR DL+YR+
Sbjct: 242 AELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDARILSATHKNLGQLVEQGQFRQDLFYRI 301

Query: 316 NVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRELK 375
           NV+++ V PLRER+ D+ +L  F  K L  + G  + + +     +++ YD+PGN+REL+
Sbjct: 302 NVIELRVPPLRERRGDVSQLSAFILKALAGKSGESVGQLSPSARGALEAYDFPGNVRELE 361

Query: 376 NLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPNDWPL 435
           N++ER + +         +L      A P    +             T    G   D  +
Sbjct: 362 NILERAMAMCDGSTIEAADLMLPQRSARPSHEPAAPGQPSAPAAAASTGADGGL--DDYI 419

Query: 436 SAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKE 474
           S +E+  I + +     NK+AAAR LG+  + L  K K+
Sbjct: 420 SNLERTAIVKALEESRYNKTAAARKLGITFRALRYKLKK 458