Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., Transcriptional regulatory protein ZraR from Xanthobacter sp. DMC5

 Score =  374 bits (959), Expect = e-108
 Identities = 213/466 (45%), Positives = 283/466 (60%), Gaps = 38/466 (8%)

Query: 17  SVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIE 76
           S+L+VDDE GM+  L + L      V  A+ +  A  L     +DL+ILD  + GR+G++
Sbjct: 34  SILVVDDEPGMRNFLVRMLQTRCRHVAEAADVAAASRLLEAAPFDLIILDNIMAGRTGLQ 93

Query: 77  WEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLN 136
           W E         DVI +T FADLETAI+AL+ GA+DF+LKPF   Q+L A+ RC+++   
Sbjct: 94  WLEELRGSGFYRDVILITAFADLETAITALRAGAADFVLKPFRSNQILNAIARCLDRGRL 153

Query: 137 ERLQYALQRDFQRH---CTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVA 193
            R  + L+R+ +         + G+SV T  ++  I +  P  ++VLI GESGTGKE+ A
Sbjct: 154 MRENFVLRRELKAMPGAAAPLMAGNSVSTRAVRAMIERVGPMPSTVLITGESGTGKEVTA 213

Query: 194 RGIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFL 252
           R +H  S R   PFVP+NC AIAPE++ESELFGH  GAFTGA  SREGLF  A GGTLFL
Sbjct: 214 RALHAVSARAAKPFVPVNCAAIAPEIIESELFGHLKGAFTGAASSREGLFFYAQGGTLFL 273

Query: 253 DEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLY 312
           DE+GE+P  MQ+ LLRV+E R VRPVG+E+E+ VDVR+VAATN NL  +V  GRFR DLY
Sbjct: 274 DEVGELPPAMQSKLLRVIEDRKVRPVGAEREIPVDVRLVAATNANLTAQVAAGRFRQDLY 333

Query: 313 YRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIR 372
           YRLNV+ I ++PLRER +D+  L   F   L A LG+P        ++ +  Y WPGN+R
Sbjct: 334 YRLNVVNIHLAPLRERPEDVAPLAHMFIAELSARLGVPPLDLTEPVLTFLTRYPWPGNVR 393

Query: 373 ELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPND 432
           EL+N+IER L+LG  P                                +V    +    D
Sbjct: 394 ELRNVIERSLILGDFPR-------------------------------DVVPEGVAEEED 422

Query: 433 WP---LSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475
            P   L AVEKAH+ +++A   GN++ AAR L V+RKTL+RK K W
Sbjct: 423 APGSALDAVEKAHMLKVLAEAGGNRAEAARRLKVSRKTLDRKLKAW 468