Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

 Score =  267 bits (683), Expect = 5e-76
 Identities = 176/465 (37%), Positives = 249/465 (53%), Gaps = 46/465 (9%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLAS--SIEEAEVLRGEHHYDLLILDINLPGRSGI 75
           VLLVDDE  ++L +++ L    + +D+AS  S E A    G  +  +++ D+ LP R G+
Sbjct: 22  VLLVDDEEMIRLSIEQTLD--LAGIDVASFASAEAALPAIGRDYPGIVVTDVRLPARDGL 79

Query: 76  EWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRL 135
           E        D    V+ +TG  D+  A+SA++ GA DFI KPF  +  ++ V+R + KR 
Sbjct: 80  ELLADIRRRDPELPVVLITGHGDVAMAVSAMREGAYDFIEKPFVSDAFVEVVKRALEKRA 139

Query: 136 ----NERLQYALQRD--FQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGK 189
               N RL+ AL R    +RH    ++G S     L+  + Q A + A VL+ GE+G GK
Sbjct: 140 LVLENRRLRTALDRGDAIERH----LVGQSAAMRRLRDDVAQLASTSADVLVLGETGAGK 195

Query: 190 ELVARGIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGG 248
           E VAR +HE   R+  PFV +NCGAI   + ESE+FGH +GAFTGA K R G    A+GG
Sbjct: 196 EQVARALHEGGVRRDKPFVAVNCGAIPESMFESEMFGHEAGAFTGAGKRRIGKIEHASGG 255

Query: 249 TLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFR 308
           TLFLDE+  MPL MQ  LLRVL+ R +  +GS   V VD+RV+AAT  +L    + GRFR
Sbjct: 256 TLFLDEVESMPLAMQVKLLRVLQDRRIERLGSNTPVPVDLRVIAATKEDLGALADAGRFR 315

Query: 309 GDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWP 368
            DL++RL+V+K+ + PLRER++D+  L   F      +   P+ +       ++   DWP
Sbjct: 316 KDLFFRLDVVKLVLPPLRERREDIPLLFELFLVQAAVKYQRPVVEVPPSLRRALMLADWP 375

Query: 369 GNIRELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLG 428
           GN+RELKN  ER +L                 +  P+ T           G     PSL 
Sbjct: 376 GNVRELKNAAERHML----------------GFLAPDFT-----------GGAAAAPSL- 407

Query: 429 YPNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYK 473
              +  L  VE+  I+  +       SAAA  L + RKTL  + K
Sbjct: 408 ---NELLDRVERLVIEDALKASGNRVSAAALALNIPRKTLHDRMK 449