Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  261 bits (666), Expect = 5e-74
 Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 14/460 (3%)

Query: 20  LVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEWEE 79
           +V+D   +  + +  L+     +++  +  +A    G    DL++LD+ LP  +G++   
Sbjct: 1   MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLY 60

Query: 80  AFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLNERL 139
           A  +      ++FMT    ++TA+ A++ GA DF++KP   +++   V   + K    +L
Sbjct: 61  AVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKA--SKL 118

Query: 140 QYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVARGIHEA 199
           +  +    Q +     IGSS   + + + I   A S+AS+ I GESGTGKE+ A  IH A
Sbjct: 119 KNDVDNKNQNY--QGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAA 176

Query: 200 SGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLDEIGEM 258
           S R   PF+ INC AI  +L+ESELFGH  GAFTGA   R+G    A+GGTLFLDE+ EM
Sbjct: 177 SKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEM 236

Query: 259 PLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYYRLNVL 318
            L +Q  LLR ++    + VGS K  +VDVR V ATNR+  +EV+ GRFR DLYYRL V+
Sbjct: 237 DLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVI 296

Query: 319 KIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRELKNLI 378
            + + PLR R  D+ E+       +  E G    + + E +   + Y+WPGN+R+L+N++
Sbjct: 297 PLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVL 356

Query: 379 ERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPNDWPLSAV 438
              ++L +      RE+  L +   P   MS   N  + L     +  +     +PL   
Sbjct: 357 RNVVVLNE-----GREIT-LDMLPPPLNQMSAPINRALPLAH---ENKVSVHEIFPLWMT 407

Query: 439 EKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEWESE 478
           EK  I+Q +   +GN   AA  L V+  T+ RK + W  +
Sbjct: 408 EKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQTWNEK 447