Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., Two-component transcriptional response regulator, LuxR family from Sphingobium sp. HT1-2

 Score =  263 bits (672), Expect = 1e-74
 Identities = 163/468 (34%), Positives = 253/468 (54%), Gaps = 24/468 (5%)

Query: 19  LLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLP-----GRS 73
           +++DD+  + L  +  L   F  V      E A         +  +LD N          
Sbjct: 16  VVIDDDDDILLAARLLLRAIFGEVLTFRDPESAFAATAGLTPEAFLLDANFSRGATNAAE 75

Query: 74  GIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNK 133
           G EW   F   D +A ++ +T  A ++ AI A+K GA+DF+ KP++ E++L  V+     
Sbjct: 76  GFEWLGRFLARDPQAVIVMITAHAGVQVAIEAMKRGATDFVTKPWSNERLLATVRTAAAL 135

Query: 134 RLNERLQYALQRDFQRHCT------TQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGT 187
           R + +     Q+D            T ++G+S     ++Q I + AP+ A+VLI GE+GT
Sbjct: 136 RASRKA--VAQKDKVAMIAAAPAGETPLLGTSPAMARVQQLIDRAAPTDANVLILGENGT 193

Query: 188 GKELVARGIHEASGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVAN 246
           GKELVAR +H  S R +   +P++ GA+A  +++SELFGH  GAFT A+  R G  + A+
Sbjct: 194 GKELVARELHRRSRRAERIMLPVDLGAVAESVIDSELFGHVKGAFTDARADRIGRLQAAD 253

Query: 247 GGTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGR 306
           GGTLFLDEIG +PL +Q  LL  LEQR V PVG+ K V VD+RV+AATN +  Q  + GR
Sbjct: 254 GGTLFLDEIGNLPLHLQPKLLTALEQRKVTPVGANKPVPVDIRVIAATNLSAGQIADEGR 313

Query: 307 FRGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYD 366
           FR DL +RLN ++I + PLRER++D+H L+  +  +   +   P+   A E ++++  YD
Sbjct: 314 FRQDLLFRLNTVEIVLPPLRERREDIHALIAHYHALYARKYAQPVHPIAPELMAALVAYD 373

Query: 367 WPGNIRELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPS 426
           WPGN+R L++ IER ++L              P   E     S  +   + +       +
Sbjct: 374 WPGNVRALRHAIERAVILA----------GDAPFGIEDIPLRSHGSPEPVRIDRAAVVEA 423

Query: 427 LGYPNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKE 474
              P+D  L  VE+  ++  +  H  N S+AA +LG+ R +L R+ ++
Sbjct: 424 PPTPDDMNLERVERRLVETALMKHGYNISSAAAELGLTRASLYRRMEK 471