Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Transcriptional regulatory protein ZraR from Pseudomonas lactucae CFBP13502

 Score =  281 bits (720), Expect = 3e-80
 Identities = 179/474 (37%), Positives = 273/474 (57%), Gaps = 31/474 (6%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEW 77
           +L+V+DE  ++  L++ L +   +V  A S++EA+       +DL++ D+ LPG  G E 
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPTFDLIVSDLRLPGAPGTEL 63

Query: 78  EEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLNE 137
            +          V+ MT +A L +A+ ++K+GA D+I KPF+ ++MLQAV R +  R + 
Sbjct: 64  IKL----GQGTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQSA 119

Query: 138 RLQYALQRDFQRHCTTQ-------------IIGSSVQTELLKQRIVQFAPSRASVLIEGE 184
               A QR   +  +               IIGS    + L  +I + AP+ ++VLI+GE
Sbjct: 120 SSAPAEQRPAGKTASAADKPGVDNSNGEIGIIGSCPPMQDLYGKIRKVAPTDSNVLIQGE 179

Query: 185 SGTGKELVARGIHEASGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFR 243
           SGTGKELVAR +H  S R + P + +NC AI   L+ESELFGH  GAFTGA   R GL  
Sbjct: 180 SGTGKELVARALHNLSKRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVE 239

Query: 244 VANGGTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVE 303
            A+GGTLFLDEIGE+PL  QA LLRVL++  +R VGS +   VDVR++AAT+R+L+   +
Sbjct: 240 AADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAK 299

Query: 304 NGRFRGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQ 363
            G+FR DLYYRL+V+ +++  LRER  D++E+   F     A +     K+A +   +++
Sbjct: 300 IGQFREDLYYRLHVIALKLPALRERGADVNEIAQAFLLRQSARINRTDLKFAPDAEQAIR 359

Query: 364 DYDWPGNIRELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSE-ISLGDNV 422
            Y WPGN+REL+N +ER ++L + P     EL G+      ++ +S   + + I L    
Sbjct: 360 HYSWPGNVRELENAVERAVILSESP-EISAELLGI------DIELSDLEDDDFIGLAPQQ 412

Query: 423 TQPSLGYPNDWPLSAVEKAHIQQIVALHEGN--KSAAARDLGVARKTL-ERKYK 473
              +  +     LS  +  + Q  V  H+ +  ++  AR LGV+RK L ER+ +
Sbjct: 413 GGSNTSHEPTEDLSLED--YFQHFVLEHQDHMTETELARKLGVSRKCLWERRQR 464