Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  275 bits (703), Expect = 2e-78
 Identities = 162/462 (35%), Positives = 254/462 (54%), Gaps = 29/462 (6%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLP-----GR 72
           VL+VDDE  +   LK  L      V    + E    L     +D ++LD+N       G 
Sbjct: 9   VLVVDDETDVLFALKMLLKTEVKEVVTEKNPENLLGLLERQKFDAILLDMNFKSALNTGN 68

Query: 73  SGIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMN 132
            G+ W     + D  A VI +T + D+E A+ +LK GA+DFI+KP++ +++L+ +   ++
Sbjct: 69  EGLFWLRQILERDKGASVILITAYGDVELAVKSLKEGAADFIVKPWHNDKLLETLHHTLD 128

Query: 133 KRLNERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELV 192
           +R  +    A      ++ +T I+G S   + +  +I + AP+ A+VLI GE+GTGKELV
Sbjct: 129 RRQQKPRTAAAP---PKNTSTSILGESDAIKEVLYKIEKIAPTEANVLILGENGTGKELV 185

Query: 193 ARGIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLF 251
           AR +HE S R   PFV ++ GA+   L ESELFG   GAFT A++ R G F  ANGGTLF
Sbjct: 186 ARALHEKSFRAANPFVSVDMGALTDSLFESELFGSKKGAFTDAREDRAGRFETANGGTLF 245

Query: 252 LDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDL 311
           LDEIG +   MQA LL VL+ R V P+GS   V VD+R+++ATN  + +     +FR DL
Sbjct: 246 LDEIGNISPAMQAKLLTVLQNRQVTPLGSNTPVPVDIRLISATNEPIYELAARNQFRKDL 305

Query: 312 YYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNI 371
            YR+N ++I + PLR+R  D+  L   F  +   +   P+P++A   +  ++ + WPGN+
Sbjct: 306 IYRINTVEIMLPPLRQRHGDVELLARHFAAVYAQKNHKPVPEFAAATLQKLKQHSWPGNV 365

Query: 372 RELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPN 431
           REL++ +ER ++L +      ++ +  P+   P                    P+  Y  
Sbjct: 366 RELQHAVERAIILAESHTLQPQDFSFSPVEMAP------------------AAPAAAYTP 407

Query: 432 DW--PLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERK 471
           +   PLS +E+  I + +  ++GN S  A++LG+ R  L R+
Sbjct: 408 ETPVPLSEIERETIVRALEKNKGNISRTAKELGLTRTALYRR 449