Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  288 bits (737), Expect = 3e-82
 Identities = 180/471 (38%), Positives = 262/471 (55%), Gaps = 40/471 (8%)

Query: 17  SVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEH--HYDLLILDINLPGRSG 74
           ++LL+DDE  ++ VL + L     +V  A +  E   L   H    ++++ D+ LP   G
Sbjct: 6   TLLLIDDENNLRQVLARVLELEGYQVLQAKNAREGFELLENHAEEVEVVLSDVKLPDDHG 65

Query: 75  IEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNK- 133
           +       +     +VI MT F  ++  +SA+K GA D++ K  N EQ++  V R  +K 
Sbjct: 66  LNILRKVKEKYPLPEVILMTAFGTIQDGVSAMKQGAFDYLTKGENDEQLIVTVARAADKA 125

Query: 134 RLNERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVA 193
           RL +R+    ++   +     IIG +   +  K+   + A + ++VL+EGE+G GKEL A
Sbjct: 126 RLRKRVAELEKQVEAKFTLDTIIGHTPALKQAKELTARVAATDSTVLLEGETGVGKELFA 185

Query: 194 RGIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFL 252
           + IH AS R+  PFV +NC A   +LLESE+FG+  GAFTGA   ++GLF  ANGGT+FL
Sbjct: 186 QAIHSASPRRSKPFVAVNCSAFPKDLLESEIFGYKKGAFTGAMADKKGLFEEANGGTIFL 245

Query: 253 DEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLY 312
           DEIGEMP  +QA  LRVLE ++   +G  K V V+VR+VAATNR+LQ E E  RFR DLY
Sbjct: 246 DEIGEMPPELQAKFLRVLETQSFTKLGDTKPVKVNVRIVAATNRDLQAEAEADRFRPDLY 305

Query: 313 YRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIR 372
           YRL+V KI V  LRER+ D+  L   F ++   ++   +   + E I  ++ Y W GNIR
Sbjct: 306 YRLSVFKIRVPTLRERQADIPLLAQHFLQLYNLKMNRRLEGMSEEFIQKLKHYPWKGNIR 365

Query: 373 ELKNLIERCLLLGKP--------PAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQ 424
           ELKN++ER ++L           PA +W         A P +  S+S+ S          
Sbjct: 366 ELKNVMERAVILADEEKLTPEHLPAEFWT--------AAPSLEASESDTS---------- 407

Query: 425 PSLGYPNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475
                     LS VE+ HI +I+   +GNK+ AAR L +   TL RK +E+
Sbjct: 408 ----------LSTVERKHIMKILEQTDGNKTEAARRLHIGLTTLYRKVQEY 448