Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  268 bits (685), Expect = 3e-76
 Identities = 163/465 (35%), Positives = 255/465 (54%), Gaps = 23/465 (4%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLP-----GR 72
           +L+VDDE  + +  K  L + F  V  +S   +   L  E+ +D+++LD+N        +
Sbjct: 8   ILVVDDEEDILMAGKLLLKQHFETVKTSSDPYKIPGLLQEYGFDVVLLDMNYSTGATSSK 67

Query: 73  SGIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQR-CM 131
            G  W +       +  VI MT + D+E A+ ALK GASDF+LKP+  ++++  ++  C 
Sbjct: 68  EGFHWLKQILQLSPKTTVILMTAYGDIELAVKALKEGASDFVLKPWQNDKLVAILKTACQ 127

Query: 132 NKR-LNERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKE 190
           N+  +++R     +++   +     IG S   + + Q + + A + A+VLI GE+GTGKE
Sbjct: 128 NRSGVSKRSAEKTEQENTAYHYDGFIGVSPAMQRVYQTLDKVAATDANVLILGENGTGKE 187

Query: 191 LVARGIHEASGRQGP-FVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGT 249
           + AR +H  S R G  F  ++ GA++  L ESELFGH  GAFT AK+ R G    A+GGT
Sbjct: 188 VAARALHRKSKRAGSVFEKVDLGAVSETLFESELFGHAKGAFTDAKEERAGRLEAASGGT 247

Query: 250 LFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRG 309
           LFLDEIG +   +QA LL VL+ R V  +G+ K   +D+R+V ATN  L + V  G FR 
Sbjct: 248 LFLDEIGNLSPALQAKLLTVLQSRQVIRLGTNKPRPIDIRLVCATNMPLYEMVREGSFRQ 307

Query: 310 DLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPG 369
           DL YR+N ++I + PLRER++D+  L   F K+   + G P      + +  + +Y WPG
Sbjct: 308 DLLYRINTVEIHLPPLRERREDIKLLADHFLKVYRQKYGRPQLHLGADTMRRLNEYHWPG 367

Query: 370 NIRELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGY 429
           NIREL + +ER ++L         EL+    Y  P     Q      S+ +         
Sbjct: 368 NIRELDHAMERAVILCD-----GNELHPDDFYFAPSENGQQKKQGLESITE--------- 413

Query: 430 PNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKE 474
            +D+ L A+EK  +Q+ +  H GN + AA++LG+ R  L R+ ++
Sbjct: 414 -SDYTLEALEKMMVQKALVKHSGNITHAAKELGITRTALYRRIEK 457