Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., sigma-54-dependent Fis family transcriptional regulator from Dickeya dianthicola ME23

 Score =  266 bits (681), Expect = 9e-76
 Identities = 168/481 (34%), Positives = 262/481 (54%), Gaps = 35/481 (7%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLP-----GR 72
           +L+VDD+  +   L+  LS    +V L+S++E+  V   +H +DL+++D+N       G+
Sbjct: 7   ILIVDDDAHILASLQMLLSMEGYQVTLSSAVEQVPVQLSQHDFDLILMDMNYQRDTTSGQ 66

Query: 73  SGIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQR--- 129
            G+   E     D    V+ MTG+  ++ A+SA++ GA DFI KP++ E++L  +++   
Sbjct: 67  EGLVLLEEIKRYDEYLPVVAMTGWGSVDIAVSAMQAGAVDFIQKPWDNERLLNVIRQQIS 126

Query: 130 -CMNKRLNERLQYA---LQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGES 185
             +++R  +RL+     L+ + + H   + +  S   + L + + Q A +  ++LI GE+
Sbjct: 127 FSLSQRSGKRLKEENTLLKMELEDHFNGEWVVESAPMKQLMRVVEQIAATETNILILGEN 186

Query: 186 GTGKELVARGIHEASGRQGP-FVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRV 244
           GTGK L+AR IH+ S R+    V +N G I   L ESE+FGH  GAFT A++SR G F +
Sbjct: 187 GTGKSLLARVIHQLSPRRDENMVSVNMGCINENLFESEMFGHVKGAFTDARESRVGRFEL 246

Query: 245 ANGGTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVEN 304
           A+ GTLFLDEIG +P+T Q+ LLR+LE+R    VGS + +    R++AATN  L   V  
Sbjct: 247 ADKGTLFLDEIGNLPMTQQSKLLRILEERCFERVGSSRTLKTHCRIIAATNAELDVRVAE 306

Query: 305 GRFRGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQD 364
           G FR DLYYR N +++ V  L ER+QD+  L   F      +   P P  +    +++  
Sbjct: 307 GTFRQDLYYRFNTIELRVPSLVERQQDIMPLALNFIDRYARKYNKPAPGLSLSGQAALSG 366

Query: 365 YDWPGNIRELKNLIERCLLL-GKPPAHYWRELNGLPIYAEPEVTMSQSN-NSEISLGDNV 422
           Y WPGNIREL +L+ER +LL G    +       LP  A  +V  ++    SE +L D  
Sbjct: 367 YHWPGNIRELSHLLERAVLLCGSSRLNSDDIFPSLPTTAPQKVAKAEPELVSEATLAD-- 424

Query: 423 TQPSLGYPNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEWESEDLSH 482
                          +E+  + Q +A  EGN   AAR LG++R      Y+  E   ++H
Sbjct: 425 ---------------IEERLLCQRMAKFEGNAVKAARSLGLSRSAF---YRRLEKYKINH 466

Query: 483 E 483
           E
Sbjct: 467 E 467