Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  281 bits (720), Expect = 3e-80
 Identities = 172/471 (36%), Positives = 264/471 (56%), Gaps = 32/471 (6%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEW 77
           +LL++D++    ++K  L K    VD  S I EA V+  +  YDL+I D  LP  +G+E 
Sbjct: 6   ILLIEDDLTYSKIIKNFLEKHDYEVDQTSKINEAFVMLDKKPYDLIITDYRLPDGTGMEV 65

Query: 78  EEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMN----K 133
            E          VI +T ++D+ TA+ ++KLGA ++I KP N +++L  V   +     +
Sbjct: 66  LENIVHNKKNTRVILITNYSDIRTAVRSMKLGAIEYITKPINPDELLTTVNEALKSPPTR 125

Query: 134 RLNERLQYALQRDFQRHCTTQ-----IIGSSVQTELLKQRIVQFAPSRASVLIEGESGTG 188
            + E    A+ +  ++   T      ++G S ++  L+Q I   AP+  SV++ GESGTG
Sbjct: 126 GVPEDQASAVSKSPKKTSKTTAGDAYVVGKSPESLQLEQYISLVAPTEMSVVVLGESGTG 185

Query: 189 KELVARGIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANG 247
           KE +++ IHE S R G PFV I+CGA++ EL  SELFGH  GAFTGA  ++ G F +ANG
Sbjct: 186 KEFISKRIHEKSKRSGGPFVAIDCGALSKELAGSELFGHVKGAFTGALDNKTGNFEMANG 245

Query: 248 GTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRF 307
           GT+FLDEIG +   +Q  LLR +++R +R +G  K++ VDVR++ ATN +L    + G F
Sbjct: 246 GTIFLDEIGNLSYEVQIKLLRAIQERKIRKIGGTKDIPVDVRIIVATNEDLSNAAKKGEF 305

Query: 308 RGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDW 367
           R DLY+RLN   ++ +PLR+R +DL      F +     LG  +  +  E     + Y W
Sbjct: 306 REDLYHRLNEFSLKSTPLRDRGEDLFHYAAIFLQDANQALGKDILGFNEEVKEIFKTYSW 365

Query: 368 PGNIRELKNLIERCLLLGKPPAHYWRELNGLPI-YAEPEVTMSQSNNSEISLGDNVTQPS 426
           PGN+RELKN+I+R +LL       + +   LP+    PE + +Q++N+            
Sbjct: 366 PGNLRELKNIIKRAVLL---TTDDYIQKESLPVDLLLPENSSTQNSNT------------ 410

Query: 427 LGYPNDWPLS--AVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475
               ND   S    EKA I + +   + NKS AA+ L + RKTL  K +++
Sbjct: 411 ----NDLKSSFEVQEKAMIIKTLNEVKHNKSKAAKILNIDRKTLYNKIEKY 457