Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  265 bits (676), Expect = 3e-75
 Identities = 169/476 (35%), Positives = 258/476 (54%), Gaps = 44/476 (9%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLP-----GR 72
           +L+VDD   +    K  L K+   V +         L   ++YD+++LD+N       G+
Sbjct: 9   ILIVDDNEDLLFAAKMLLKKYAKEVTIEKDPRRIPFLVNNNNYDVILLDMNFTEDTTSGK 68

Query: 73  SGIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMN 132
            G  W +   + D +A VI +T F D+E A+ ALK GA+DFILKP+  E++L  +     
Sbjct: 69  EGFHWLKQIKEIDPKAVVILITAFGDVEMAVQALKEGATDFILKPWQNEKLLATLSAA-- 126

Query: 133 KRLNERLQYA---------LQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEG 183
            RL E              LQ D ++  + +IIG S   + +   I + A + A+VLI G
Sbjct: 127 SRLKESYDQVDNISQKSRQLQADMKKPFS-EIIGQSSSMKNIFSIIDKVAQTDANVLILG 185

Query: 184 ESGTGKELVARGIHEASGRQGP-FVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLF 242
           E+GTGKEL+AR IH+ S R+   FV ++ GAI   L ESELFGH  GAFT AK+ R G F
Sbjct: 186 ENGTGKELIARAIHDRSLRRDEIFVGVDMGAITETLFESELFGHKRGAFTDAKEDRAGRF 245

Query: 243 RVANGGTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEV 302
            VA+ GTLFLDEIG + + +Q+ LL VL++R V  +G+ K + VD+R++ ATN  +   V
Sbjct: 246 EVADKGTLFLDEIGNLSMPLQSKLLTVLQKREVTRIGTNKSIPVDIRLICATNMKVHDMV 305

Query: 303 ENGRFRGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSM 362
               FR DL YR+N ++I + PLRER+ D+  L   F K+   +       +    I  +
Sbjct: 306 MENTFRQDLLYRVNTVEIFLPPLRERQDDIPLLANHFLKVYAKKYRKDFSGFKPAAIQLL 365

Query: 363 QDYDWPGNIRELKNLIERCLLLGKPPAHYWRELNGLPIY---AEPEVTMSQSNNSEISLG 419
           Q+Y WPGNIREL++ IER +++ +      +EL+    +   ++P     ++N +     
Sbjct: 366 QNYSWPGNIRELQHAIERAIIMAE-----GQELDSRDFFFLSSKPSAEKVKTNGT----- 415

Query: 420 DNVTQPSLGYPNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475
                          L  VEK  IQ+ +  + GN S AA++LG+ R +L R+ +++
Sbjct: 416 -------------LNLDEVEKNVIQKAIDKNGGNISKAAKELGLTRASLYRRLEKY 458