Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  271 bits (692), Expect = 4e-77
 Identities = 146/369 (39%), Positives = 225/369 (60%), Gaps = 3/369 (0%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEW 77
           +L++DDE  ++  LK+ L      +  A    E         +DL++ DI +P   G+E 
Sbjct: 4   ILIIDDEKVIRSTLKEILEYEDYEIHEAQDGVEGLKKIESQDFDLVLCDIKMPKMDGLEV 63

Query: 78  EEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLNE 137
            +     D +   I ++    +E+A+ A K GA DFI KP +L ++L  V+  + K+   
Sbjct: 64  LDKVYQSDKQPQFIMISAHGSIESAVEATKKGAFDFIPKPPDLNRLLLTVRNALEKKDLV 123

Query: 138 RLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVARGIH 197
                L++   +     ++G S     +K+ I + AP+ A VLI G +GTGKELVA  +H
Sbjct: 124 TETKVLKKKLSKKL--DMVGESAAILQVKETIEKVAPTDARVLITGPNGTGKELVAHWLH 181

Query: 198 EASGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLDEIG 256
           + SGR + PF+ +NC AI  EL+ESELFGH  GAFT A K R+G F  ANGGT+FLDEIG
Sbjct: 182 QKSGRNKSPFIAVNCAAIPAELIESELFGHEKGAFTSANKQRQGKFEQANGGTIFLDEIG 241

Query: 257 EMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYYRLN 316
           +M L+ QA +LR L++  +  VG +K++ +DVRV+AATN++L++E+E   FR DLY+RL+
Sbjct: 242 DMSLSAQAKVLRALQEHKISRVGGDKDIKIDVRVLAATNKDLKKEIEENNFREDLYHRLS 301

Query: 317 VLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRELKN 376
           V+ I+V  L++RK+D+  L+  F + +  E G        + I+ +Q+Y W GNIREL+N
Sbjct: 302 VILIQVPALKDRKEDIPLLVDRFLEDIAKEYGTTKKDIDDKAIAKLQEYPWTGNIRELRN 361

Query: 377 LIERCLLLG 385
           ++ER ++LG
Sbjct: 362 VVERLIILG 370