Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54-dependent Fis family transcriptional regulator from Phocaeicola dorei CL03T12C01

 Score =  261 bits (667), Expect = 3e-74
 Identities = 156/466 (33%), Positives = 254/466 (54%), Gaps = 34/466 (7%)

Query: 17  SVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLP-----G 71
           ++L+VDD  G+   L+  L   FS +  A    +   +      D++ILD+N       G
Sbjct: 5   TILIVDDNKGVLASLELLLETEFSEIKTAHHPNQIISILNTSPVDVIILDMNFSAGINNG 64

Query: 72  RSGIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCM 131
             G+ W +   +      V+ +T + D+E A+ ALK  A+DF+LKP++   ++  ++   
Sbjct: 65  NEGLYWLKRIREIAPALPVVMLTAYGDVELAVRALKNDATDFLLKPWDNRTLVCKIKEAF 124

Query: 132 NKRLNERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKEL 191
                 +      R   R  +  I+G+S   + L + +V+ A + A++LI GE+GTGKE+
Sbjct: 125 GSGKKRK-----NRVPDRSQSPMIVGTSPAMQQLMKMVVKVARTDANILITGENGTGKEM 179

Query: 192 VARGIHEASGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTL 250
           +A+ IH  S R +   V ++ GAI+  L ESELFGH  G+FT A +SR G F  A+G +L
Sbjct: 180 LAQEIHRLSTRREHTMVTVDMGAISESLFESELFGHERGSFTDAYESRPGKFEAASGSSL 239

Query: 251 FLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGD 310
           F+DEIG +PL MQA LL VL+ R +  +GS K + VD+R+++ATN+N+Q+ V++G FR D
Sbjct: 240 FMDEIGNLPLAMQAKLLTVLQNRKITRIGSNKVIPVDIRLLSATNKNIQEMVDSGTFRED 299

Query: 311 LYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGN 370
           L YRLN + +E+ PLRER  D+H  + +F +   A+            +  +  Y WPGN
Sbjct: 300 LLYRLNTIHLEIPPLRERGNDIHLFIDYFMQRYAAKYEKKDISLHEHALEKLCSYHWPGN 359

Query: 371 IRELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYP 430
           IREL++ IE+ ++L +             +    ++ + Q+ N + S     T P+    
Sbjct: 360 IRELQHAIEKAIILCEG-----------NVIRPKDIFVKQTWNPQFS----TTVPN---- 400

Query: 431 NDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEWE 476
               L  VE+  I   +  ++GN +A A  LG++R+TL  K K ++
Sbjct: 401 ----LEEVERQAIATAIRQNDGNLTATAEQLGISRQTLYNKIKRFK 442