Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  117 bits (294), Expect = 1e-30
 Identities = 91/268 (33%), Positives = 137/268 (51%), Gaps = 22/268 (8%)

Query: 417 QEKTAQLEHHIALLNQTRN----KLVVHEKLAALGELTAGIAHEINNPTAVILGNTELI- 471
           QE T  LE  +A   Q R+    +L   +KL A+G LT G+AH+ NN   VI GN  L+ 
Sbjct: 166 QELTHNLEQRVAAEVQARSAAEDQLRQSQKLEAIGGLTGGVAHDFNNLLQVIAGNLHLLA 225

Query: 472 RFELGADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQDEI-TWQHVNPIIDESIT 530
           R E   D ++V+  + A +  +ER   ++  LL ++R+  +   +   Q +   + E + 
Sbjct: 226 RHE--PDNAQVQRRVAAAIAAVERGSKLSSQLLAFARRQPLSPAVYNPQRIYAGLGELLQ 283

Query: 531 LVKTGSKKRDIEFVLELKAHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRITIRSE---- 586
                +   D++   +    N   V+R+QL   L+NL +NA  AMNG+G I I  E    
Sbjct: 284 RALGETIHIDVQLPQDSWFIN---VDRNQLENALLNLAINARDAMNGEGVIRITGENIIL 340

Query: 587 ---DWVEEGQNRGAVIHIE--DQGCGIKPENLKRIFDPFYTTKRE--GTGLGLSVSQSLL 639
              D   +G   G  + +   D G G+    LKR F+PF+TTKRE  GTGLGLS+    +
Sbjct: 341 NPDDCAGKGIKPGEYVRLAVIDTGVGMSESTLKRAFEPFFTTKREGHGTGLGLSMVFGFV 400

Query: 640 SQSGGEIKVQSELGVGSTFSIFLPSKNE 667
            QSGG +++ SE G GS   ++ P   E
Sbjct: 401 RQSGGHVEMWSEEGKGSVVQMYFPHSLE 428