Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  120 bits (302), Expect = 1e-31
 Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 53/388 (13%)

Query: 284 YITAYEPIRDQYHNEIGMLYTGYLMWPFLKAYVTNILEVGIITLFLLVISGLFVYRG--- 340
           Y   Y PI +   +  G++++G L    L   V    +  +  L  L+ S L +  G   
Sbjct: 243 YSGLYWPIFNDAGDLQGVIFSGLLRHTSLVGLVN---QSNLFVLIFLLSSALSLAAGVLV 299

Query: 341 SRDLFRPIERIHRVVKMVQLGKNQRIGQIGLDDKHELAQLAKQFDNMLDQLQQRNEEIVQ 400
           SR L +P+  + + V  V  G      ++ +    ELAQL+  F++M ++L +       
Sbjct: 300 SRRLTKPLRDLSQGVSAVISGDYAH--RVVVSGGDELAQLSSTFNHMTERLGE------- 350

Query: 401 AAHELEAKVQSRTASLQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNP 460
             H LEA+++ R                            ++L ALGE+  G+AHEI NP
Sbjct: 351 -LHHLEAQLRRR----------------------------DRLHALGEVAMGLAHEIRNP 381

Query: 461 TAVILGNTELIRFELGADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQDEITWQH 520
             +I   T+L+       A   +  ++ ++ ++ RI ++    L +++       +    
Sbjct: 382 LGIIKTATQLLHRRADL-ADTDKRHLEYVISEVSRINDLITEFLDFAKPNPPLRVLL--P 438

Query: 521 VNPIIDESITLVKTGSKKRDIEFVLELKAHNS-VEVNRHQLLQILVNLQMNAIHAMNGKG 579
             P+++E +           I+  ++ +A  + +  +  QL Q  +NL +NAI AM   G
Sbjct: 439 ARPLVEEILGFCAPELATHTIDAQIDDQAPGATIYADAKQLKQACLNLILNAIDAMPEGG 498

Query: 580 RITIRSEDWVEEGQNRGAVIHIEDQGCGIKPENLKRIFDPFYTTKREGTGLGLSVSQSLL 639
           R+T+       +G+N   VI I D G GI  + ++RIF PF TTK  GTGLGL+   S++
Sbjct: 499 RLTLGIR---ADGEN--TVISIADTGQGIPADMIERIFTPFVTTKASGTGLGLAKVYSIM 553

Query: 640 SQSGGEIKVQSELGVGSTFSIFLPSKNE 667
               G I+  SE   G+TFS+++P+  E
Sbjct: 554 ESHDGSIECASEKDAGATFSLYIPASGE 581