Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  107 bits (266), Expect = 3e-27
 Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 31/269 (11%)

Query: 430 LNQTRNKLVVHEKLAALGELTAGIAHEINNPTAV-------ILGNTELIRFELGADASRV 482
           L Q +  L+  EK+A+LG L AG+AHEIN P  +       +   TE +R   G  A   
Sbjct: 505 LQQAQQSLIQAEKMASLGGLVAGVAHEINTPVGIGLTGASTLASETERLRKLYGEQAMTE 564

Query: 483 EEEIDAILLQIERIR------NITRSLLQYSRQGGVQDEITWQH---VNPIIDESITLVK 533
           E+ +D + +  E  R      N    L+   +Q  V      +    +   I+E +  + 
Sbjct: 565 EDFLDYLGVAAETARLLLANMNRAAELIHSFKQVAVDQTSAERRRFDLKTYIEEILNSLT 624

Query: 534 TGSKKRDIEFVLELKAHNSVEVNRHQ--LLQILVNLQMNAI-HAM--NGKGRITIRSEDW 588
              KKR +   +E+   + +E+N +   L Q+L NL MNA+ HA   N  G + IR +D 
Sbjct: 625 PTIKKRRLG--VEVSCPDGIEMNSYPGILSQVLTNLVMNAVVHAYEENQAGILGIRVQDL 682

Query: 589 VEEGQNRGAVIHIEDQGCGIKPENLKRIFDPFYTTKR--EGTGLGLSVSQSLLSQS-GGE 645
            +E      ++   D G GI  ENL RIFDPF+TT+R   G+GLGL +  ++++ S  G+
Sbjct: 683 GDE-----VLLAFSDDGKGISAENLSRIFDPFFTTRRGNGGSGLGLHIVFNVVTGSLNGQ 737

Query: 646 IKVQSELGVGSTFSIFLPSKNEAKLRETL 674
           I V SE G G+TF++  P    + L E +
Sbjct: 738 IDVASEPGRGTTFTLRFPKTVRSPLLEDM 766