Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 782 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  119 bits (298), Expect = 5e-31
 Identities = 83/253 (32%), Positives = 126/253 (49%), Gaps = 31/253 (12%)

Query: 432 QTRNKLVVHEKLAALGELTAGIAHEINNPTAVILGNTELIRFELGADASRVEEEIDAILL 491
           +T   L   +KL A+G+LT GIAH+ NN   +I GN EL++  L  D  +    +D  L 
Sbjct: 397 RTEEALRRSQKLEAVGQLTGGIAHDFNNLLGIITGNLELLQKNLAND-EKANRRLDTALK 455

Query: 492 QIERIRNITRSLLQYSRQG---------GVQDEITWQHVNPIIDESITLVKTGSKKRDIE 542
              R  ++TR LL +SRQ           + D +T   +  ++  S+T +     K D  
Sbjct: 456 SARRGADLTRRLLAFSRQAPTVVGNDPIDINDAVTG--MLDMLQRSLTQIVQVKTKLD-- 511

Query: 543 FVLELKAHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRITIRSEDWVEEGQNRG------ 596
                 A     VNR +    L+NL +NA  AM   G + I + + V E ++        
Sbjct: 512 -----PALWKTVVNRSEFEDALLNLAINARDAMPDGGTLAIETSNIVVEAEHARFDPNLQ 566

Query: 597 ----AVIHIEDQGCGIKPENLKRIFDPFYTTKR--EGTGLGLSVSQSLLSQSGGEIKVQS 650
                V+ + D G GI  + + +IF+PF+TTK   +GTGLGLS+      +SGG ++V S
Sbjct: 567 PGEYIVLMVSDSGTGISKDIVDKIFEPFFTTKERGKGTGLGLSMVYGFARRSGGHVRVYS 626

Query: 651 ELGVGSTFSIFLP 663
           ELGVG+ F ++ P
Sbjct: 627 ELGVGTAFRLYFP 639