Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  112 bits (280), Expect = 6e-29
 Identities = 84/261 (32%), Positives = 124/261 (47%), Gaps = 22/261 (8%)

Query: 411 SRTASLQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNPTAVILGNTEL 470
           SR AS      +    +    +    L   +K+ ALG+LT G+AH+ NN     L N  L
Sbjct: 325 SRAASESAAVRRWAEEVRNRERLEEALRQSQKMEALGQLTGGVAHDFNNLLTAALANLHL 384

Query: 471 IRFELGADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQDEI-----TWQHVNPII 525
           +   L AD  R    +      +ER   +TR LL +SRQ  V   +     + + +  ++
Sbjct: 385 LSRHLPADGQRF---LGGARTALERAEKLTRQLLSFSRQDAVNPTVVDLGDSLRRMADLL 441

Query: 526 DESITLVKTGSKKRDIEFVLELK-AHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRITIR 584
           + SI        + D+    ++     +V V++ QL   ++NL +NA  AM G GRI I 
Sbjct: 442 ERSI--------RADVVLEWDIAPVPMAVAVDQVQLEMAVLNLVLNARDAMPGGGRIRIA 493

Query: 585 SEDWVEEGQNRGAVIHIEDQGCGIKPENLKRIFDPFYTTK--REGTGLGLSVSQSLLSQS 642
           +    E    R A I + D G G+ P+ + R FDPF+TTK   +GTGLGLS+      QS
Sbjct: 494 AAPGPEP---RTARIEVSDSGAGMPPDVMARAFDPFFTTKGVGKGTGLGLSMVYGFARQS 550

Query: 643 GGEIKVQSELGVGSTFSIFLP 663
           GG   + S  G G+   I LP
Sbjct: 551 GGSATIDSRPGEGTHVCIDLP 571