Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  295 bits (754), Expect = 5e-84
 Identities = 171/526 (32%), Positives = 289/526 (54%), Gaps = 11/526 (2%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MI+ + I    G KPL E  S     G++ GL+G NGCGKST   +L  EL    G+ S 
Sbjct: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
             +  +A + Q+  A +  T ++ VI G +E  +++++      +     ++G +VADL 
Sbjct: 61  PAHWELAWVAQETPALDR-TALEYVIDGDREYRELERQ-----LMDAEAADNGTKVADLH 114

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
            +   + GY   ++A ELL  +G   EQ    ++  + GW++R+ LAQ L    D++LLD
Sbjct: 115 GKIEMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLD 174

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTN+LD+D + WLE  L +   T+I+ISHDR FL+ +   +  ++   L  Y GNY  +
Sbjct: 175 EPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSF 234

Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
            T   Q   +  +   K++ Q+A +Q+++ RF   ASKA+QA SR + ++  ++++V  +
Sbjct: 235 ETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALE--RMEKVLPA 292

Query: 301 SRQNPF-IRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKT 358
              NPF   F +   L    L+++ ++ G+ DH +          G R+ ++G NG GK+
Sbjct: 293 QFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKS 352

Query: 359 TLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVR 418
           TL+  L+G L+P+SG   +S+   IGY+AQ        +   ++ M Q   +  +E  +R
Sbjct: 353 TLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPD-KNELELR 411

Query: 419 SFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNN 478
           ++LG   F  +   + V   SGGE+ R++L  ++  KPN+LLLDEPTNH+D++  ++L  
Sbjct: 412 NYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTL 471

Query: 479 ALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLK 524
           AL+ Y+G +  VSHDR  + +    +  + D ++  F G   ++ K
Sbjct: 472 ALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYK 517



 Score = 91.7 bits (226), Expect = 8e-23
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 31/224 (13%)

Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDH-- 390
           L    +A    G++V ++G+NG GK+TL   L   L   +G +    +  + + AQ+   
Sbjct: 16  LLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSKPAHWELAWVAQETPA 75

Query: 391 ----AHEFAEDLNLMEWMGQWRQEGDDEQV--------------------VRSFLGRML- 425
               A E+  D +  E+    RQ  D E                      +R+    +L 
Sbjct: 76  LDRTALEYVIDGD-REYRELERQLMDAEAADNGTKVADLHGKIEMVGGYSIRARASELLD 134

Query: 426 ---FGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQ 482
              F Q+ +  S+   SGG + R+ L + ++ + ++LLLDEPTNH+D++++  L   L+ 
Sbjct: 135 GLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVMWLERWLQS 194

Query: 483 YKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
           Y GTL  +SHDR F+D +  RI+ I +  + ++ G Y+ F   R
Sbjct: 195 YPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQR 238