Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 636 a.a., putative of ABC superfamily informational factor: ATP-binding components from Pseudomonas putida KT2440
Score = 298 bits (763), Expect = 4e-85
Identities = 183/524 (34%), Positives = 281/524 (53%), Gaps = 11/524 (2%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
MI +N+T Q G + L E + G++ GLIGANG GKS+ +L GEL P G+
Sbjct: 1 MIRLSNLTLQRGPQRLLEGAEMTLHAGHKAGLIGANGAGKSSLFALLRGELSPDAGDCQL 60
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
+ R+A + Q+ + V D V+ G L KV+ E A E DG +A L
Sbjct: 61 PGDWRIAHMRQEVDTLDRLAV-DYVLDGDVRLRKVQAE----LAAAEQAH-DGTALARLH 114
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
E DGY A+++A +LL +G EQ + + GW++R+ LAQ L D++LLD
Sbjct: 115 SELESADGYTADARARKLLAGLGFTNEQMDRRVGDFSGGWRMRLNLAQALMCPSDLLLLD 174
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LD+D I WLED L T+++ISHDR FL++V H+ ++ +L +Y G Y +
Sbjct: 175 EPTNHLDLDAILWLEDWLKGYPGTLLLISHDRDFLDAVVDHVLHVEQRKLNLYKGGYTAF 234
Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
+ + K++AQ A ++ ++ARF A A+KA+QA SR + ++ +++E+ A+
Sbjct: 235 ERTRAERLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALE--RMEELSAA 292
Query: 301 SRQNPF-IRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKT 358
+PF F +S+++ L + G+ D + G R+ ++G NG GK+
Sbjct: 293 HVDSPFDFVFRESQKISSPLLSLSEGRLGYGDKAILDKVKLQLTPGARIGLLGPNGAGKS 352
Query: 359 TLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVR 418
TL+ LAG LEP SG EN +GY+AQ H + +D Q + EQ +R
Sbjct: 353 TLIKNLAGELEPLSGRLVRGENLAVGYFAQ-HQLDSLDDKASPLLHLQRIAPTEREQTLR 411
Query: 419 SFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNN 478
FLG F + V SGGE+ R+ L + +PN+LLLDEPTNH+D+E +L
Sbjct: 412 DFLGGFDFHGARCDEPVVNFSGGEKARLALALIAWERPNLLLLDEPTNHLDLEMRLALTM 471
Query: 479 ALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
AL+++ G + VSHDR + S + + DGK+ F G ++
Sbjct: 472 ALQEFAGAVVVVSHDRHLLKSTTDDFLLVADGKVDTFDGDLEDY 515
Score = 88.6 bits (218), Expect = 6e-22
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 344 GERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQD-------------- 389
G + +IG NG GK++L L G L P +G + + I + Q+
Sbjct: 27 GHKAGLIGANGAGKSSLFALLRGELSPDAGDCQLPGDWRIAHMRQEVDTLDRLAVDYVLD 86
Query: 390 ------------HAHEFAEDLNLMEWMGQWRQEGDD---EQVVRSFLGRMLFGQDDIKKS 434
A E A D + + + D + R L + F + + +
Sbjct: 87 GDVRLRKVQAELAAAEQAHDGTALARLHSELESADGYTADARARKLLAGLGFTNEQMDRR 146
Query: 435 VKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVSHDR 494
V SGG + R+ L + +M ++LLLDEPTNH+D+++I L + L+ Y GTL +SHDR
Sbjct: 147 VGDFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKGYPGTLLLISHDR 206
Query: 495 VFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
F+D++ ++ + K+ +KG Y F ++R
Sbjct: 207 DFLDAVVDHVLHVEQRKLNLYKGGYTAFERTR 238
Score = 80.1 bits (196), Expect = 2e-19
Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 44/259 (16%)
Query: 11 FGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLN 70
+G K + + + ++ G R GL+G NG GKST +K L+GELEP G + N V
Sbjct: 322 YGDKAILDKVKLQLTPGARIGLLGPNGAGKSTLIKNLAGELEPLSGRLVRGENLAVG--- 378
Query: 71 QDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYM 130
FA + +D L ++ E T D + + A D +
Sbjct: 379 --YFAQHQLDSLDDKASPLLHLQRIAPTER------EQTLRDFL--GGFDFHGARCDEPV 428
Query: 131 AESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNNLDIDT 190
GE K R+ LA I + P+++LLDEPTN+LD++
Sbjct: 429 VNFSGGE-----------------------KARLALALIAWERPNLLLLDEPTNHLDLEM 465
Query: 191 IRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEYMTAATQARER 250
L L ++++SHDRH L S + G++ + G+ ++Y + R+R
Sbjct: 466 RLALTMALQEFAGAVVVVSHDRHLLKSTTDDFLLVADGKVDTFDGDLEDYSRWLVEYRQR 525
Query: 251 LL--------SDNAKKKAQ 261
D KKAQ
Sbjct: 526 SAPASTAPANPDKTDKKAQ 544