Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., ABC transporter ATP-binding protein from Erwinia tracheiphila SCR3

 Score =  278 bits (710), Expect = 6e-79
 Identities = 169/526 (32%), Positives = 289/526 (54%), Gaps = 15/526 (2%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MI  +++  + G + L +N +       + GL+G NGCGKST + +L  E+   GG+++ 
Sbjct: 1   MIVFSSLQIRRGVRVLLDNATATINPRQKVGLVGKNGCGKSTLLSLLKNEISADGGSMTC 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
             +  +A +NQ+  A      I+ VI G +E  ++++  D    +     +DG  +A L 
Sbjct: 61  PGSWSLAWVNQETPALS-IPAIEYVIDGDREFRQLERNLDHANKI-----DDGHAIATLH 114

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
            +   +  +  +S+A  LL  +G   EQ    +S  + GW++R+ LAQ L    D++LLD
Sbjct: 115 GKLDAIQAWTIQSRAATLLKGLGFSQEQLQRPVSDFSGGWRMRLNLAQALICRSDLLLLD 174

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYD-- 238
           EPTN+LD+D + WLE  L +   T+I+ISHDR FL+ +   +  ++   +  Y GNY   
Sbjct: 175 EPTNHLDLDAVIWLERWLKSYQGTLILISHDRDFLDPIVDKILHIEQQSIFEYTGNYSSF 234

Query: 239 EYMTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVK 298
           E   A   A+++ + +N  ++A++A LQ+F+ RF A ASKAKQA SR + +++++L  + 
Sbjct: 235 EIQRATKLAQQQSMYEN--QQAKVAHLQSFIDRFKAKASKAKQAQSRIKMLERMEL--IA 290

Query: 299 ASSRQNPFIRFEQSKELFRNALI-VENLSQGFDHDLFSNFNAIFEV-GERVAIIGENGVG 356
            +   NPF    ++ E   N L+ +E +S G+   +  N   +  V G R+ ++G NG G
Sbjct: 291 PAHVDNPFTFSFRAPENLPNPLLNMEKVSAGYGERIILNSIKLNLVPGSRIGLLGRNGAG 350

Query: 357 KTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQV 416
           K+TL+  LAG L P  G    ++   +GY+AQ        D + ++ + +   +   EQ 
Sbjct: 351 KSTLIKLLAGELAPLQGDIGLAKGIKLGYFAQHQLEFLRADESPLQHLVRIAPK-ILEQQ 409

Query: 417 VRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESL 476
           +R +LG   F  D + ++    SGGE+ R++L  ++  +PN+LLLDEPTNH+D++  ++L
Sbjct: 410 LRDYLGGFGFQGDKVSENTGRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQAL 469

Query: 477 NNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
             AL  ++G L  VSHDR  + S    +  +  GK+  F G   ++
Sbjct: 470 TEALIDFEGALVVVSHDRHLLRSTTDDLYLVHGGKVEAFDGDLEDY 515



 Score = 91.3 bits (225), Expect = 1e-22
 Identities = 70/302 (23%), Positives = 139/302 (46%), Gaps = 36/302 (11%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           +++   ++  +G + +  +I +    G+R GL+G NG GKST +K+L+GEL P  G++  
Sbjct: 312 LLNMEKVSAGYGERIILNSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPLQGDIGL 371

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
               ++    Q Q    EF   D   + H            +   P++ E+   ++ D  
Sbjct: 372 AKGIKLGYFAQHQL---EFLRADESPLQHL-----------VRIAPKILEQ---QLRDYL 414

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
             F    G+  +             + ++ G  S    G K R++LA I++  P+++LLD
Sbjct: 415 GGF----GFQGDK------------VSENTGRFSG---GEKARLVLALIVWQRPNLLLLD 455

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTN+LD+D  + L + L      ++++SHDRH L S    +  +  G++  + G+ ++Y
Sbjct: 456 EPTNHLDLDMRQALTEALIDFEGALVVVSHDRHLLRSTTDDLYLVHGGKVEAFDGDLEDY 515

Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
               ++ +++  +    K       Q    +    A +  Q     +QI+K++    K +
Sbjct: 516 QRWLSELQKQETASTESKPDNGNSAQARKDQKRREAERRTQTQPLRKQIEKLEKQMEKLN 575

Query: 301 SR 302
           ++
Sbjct: 576 NQ 577