Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  286 bits (732), Expect = 2e-81
 Identities = 169/515 (32%), Positives = 282/515 (54%), Gaps = 15/515 (2%)

Query: 12  GAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLNQ 71
           G + L +N +     G + GL+G NGCGKST + +L GE+   GG+V++  N  +A +NQ
Sbjct: 12  GTRVLLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEISADGGSVTFPQNWALAWVNQ 71

Query: 72  DQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYMA 131
           +  A    + ID VI G +E  +++ + D   A       DG  +A L  +   +  +  
Sbjct: 72  ETPALAR-SAIDYVIDGDREFRQLEADLDAANA-----RNDGNAIATLHGKLDAIQAWSI 125

Query: 132 ESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNNLDIDTI 191
            ++A  LL  +G   EQ    +S  + GW++R+ LAQ L    D++LLDEPTN+LD+D +
Sbjct: 126 PARAASLLNGLGFQQEQLQQSVSDFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDAV 185

Query: 192 RWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYD--EYMTAATQARE 249
            WLE  L     T+++ISHDR FL+ +   +  ++   L  Y GNY   E   A   A++
Sbjct: 186 IWLEKWLKNYPGTLVLISHDRDFLDPIANRILHIEQETLFEYTGNYTSFEQQRATRLAQQ 245

Query: 250 RLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRQNPFIRF 309
           + +  + +++  +  LQ ++ RF A ASKAKQA SR + +++++L  +  +   NPF   
Sbjct: 246 QAMYQHQQER--VTHLQHYIDRFRAKASKAKQAQSRIKMLERMEL--IAPAHVDNPFRFS 301

Query: 310 EQSKELFRNALI-VENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGV 367
            ++ E   N L+ +E +S G+ D  +  +       G R+ ++G NG GK+TL+  LAG 
Sbjct: 302 FRAPEALPNPLLRMEKISAGYGDRLILDSIKLNLVPGSRIGLLGHNGAGKSTLIKLLAGE 361

Query: 368 LEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVRSFLGRMLFG 427
           L+P SG    ++   +GY+AQ        D + ++ + +   E + EQ +R +LG   F 
Sbjct: 362 LQPFSGDIGLAKGVRLGYFAQHQLEFLRPDESPLQHLVR-LAERETEQQLRDYLGGFDFR 420

Query: 428 QDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTL 487
            D + +  +  SGGE+ R++L  ++  +PN+LLLDEPTNH+D++  ++L  AL  ++G L
Sbjct: 421 GDKVTEPTERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL 480

Query: 488 FFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
             VSHDR  + S    +  + D K+  F G   ++
Sbjct: 481 VVVSHDRHLIRSTTDDLYLVHDRKVEPFDGDLEDY 515



 Score =  101 bits (251), Expect = 1e-25
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 37/227 (16%)

Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGY------- 385
           L  N  A    G++V ++G+NG GK+TLL+ L G +    G   + +N  + +       
Sbjct: 16  LLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEISADGGSVTFPQNWALAWVNQETPA 75

Query: 386 -------YAQDHAHEFAE---DLNLMEWMGQWRQEGDDEQVVR----------------S 419
                  Y  D   EF +   DL+        R +G+    +                 S
Sbjct: 76  LARSAIDYVIDGDREFRQLEADLDA----ANARNDGNAIATLHGKLDAIQAWSIPARAAS 131

Query: 420 FLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNA 479
            L  + F Q+ +++SV   SGG + R+ L + ++ + ++LLLDEPTNH+D++++  L   
Sbjct: 132 LLNGLGFQQEQLQQSVSDFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDAVIWLEKW 191

Query: 480 LEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
           L+ Y GTL  +SHDR F+D +A RI+ I    + ++ G Y  F + R
Sbjct: 192 LKNYPGTLVLISHDRDFLDPIANRILHIEQETLFEYTGNYTSFEQQR 238



 Score = 92.4 bits (228), Expect = 4e-23
 Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 56/307 (18%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           ++    I+  +G + + ++I +    G+R GL+G NG GKST +K+L+GEL+P  G++  
Sbjct: 312 LLRMEKISAGYGDRLILDSIKLNLVPGSRIGLLGHNGAGKSTLIKLLAGELQPFSGDIGL 371

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
               R+    Q Q    EF   D   + H                        +R+A+ E
Sbjct: 372 AKGVRLGYFAQHQL---EFLRPDESPLQHL-----------------------VRLAERE 405

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
            E    D        G+    V  P E+  G       G K R++LA I++  P+++LLD
Sbjct: 406 TEQQLRDYLGGFDFRGD---KVTEPTERFSG-------GEKARLVLALIVWQRPNLLLLD 455

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTN+LD+D  + L + L      ++++SHDRH + S    +  +   ++  + G+ ++Y
Sbjct: 456 EPTNHLDLDMRQALTEALIDFEGALVVVSHDRHLIRSTTDDLYLVHDRKVEPFDGDLEDY 515

Query: 241 ----MTAATQ--ARERLLSDNAKKKAQI--------AELQTFVARFSANASKAKQATSRA 286
               + A  Q  A E +  DN    AQ         AEL+T            KQ T   
Sbjct: 516 QQWLLDAQKQDNAAESVARDNVANSAQSRKDQKRRDAELRTLTQPL------RKQITQLE 569

Query: 287 RQIDKIK 293
           +Q++K++
Sbjct: 570 QQMEKLQ 576