Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  303 bits (775), Expect = 1e-86
 Identities = 173/536 (32%), Positives = 288/536 (53%), Gaps = 9/536 (1%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MI   NI++    + L+   S     G + GL+G NG GK+T  ++++GE +P  G V  
Sbjct: 1   MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGEDQPDEGQVVV 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYAL----PEMTEEDGM-- 114
           +    V   +QD       + +  V+ G   + +V  E   + A       M E D +  
Sbjct: 61  EKGMTVGYFDQDVGEMSGHSAVAEVMEGAGPVSEVAAELRELEAAMSDPDRMDEMDAIIE 120

Query: 115 RVADLEVEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADP 174
           R  +++  + E+DGY  E +A E+L  +    E   G +S ++ GWK+RV LA+IL   P
Sbjct: 121 RYGEVQARYEELDGYALEGRAREVLDGLSFSQEMMDGDVSKLSGGWKMRVALARILLMRP 180

Query: 175 DIMLLDEPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYP 234
           D+MLLDEP+N+LD++++ WLED L   +  +++ SHDR F+N + T + ++D G L  Y 
Sbjct: 181 DVMLLDEPSNHLDLESLIWLEDFLKNYDGALLMTSHDREFMNRIVTKIIEIDAGSLTTYS 240

Query: 235 GNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKL 294
           G+Y  Y     Q  ++  +   +++A +A+   F+ RF A AS A Q  SR ++++KI  
Sbjct: 241 GDYGFYEQQRAQNEKQQQAQFERQQAMLAKEIKFIERFKARASHASQVQSRVKKLEKIDR 300

Query: 295 DEVKASSRQNPFIRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGEN 353
            E     RQ     F  +     + + ++ +++ +    ++   + +    ER  I+G N
Sbjct: 301 VE-PPKRRQTVAFEFAPAPRSGEDVVALKKVNKAYGSRTIYGELDFMVRRKERWCIMGVN 359

Query: 354 GVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDD 413
           G GK+TLL  + G   P SG      +  +GY+AQ        D  ++EW+ + R     
Sbjct: 360 GAGKSTLLKLVTGTTAPDSGNVTLGASVKLGYFAQHAMDVLDGDSTILEWLEE-RFPKAG 418

Query: 414 EQVVRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESI 473
           +  +R+  G   F  DD++K  +VLSGGE+ R+++  ++   PN L+LDEPTNH+D+++ 
Sbjct: 419 QAPLRALSGCFGFSGDDVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTK 478

Query: 474 ESLNNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSRGVE 529
           E L  AL  Y+GT+ FVSHDR F+ +L+ R++E+    I  F G Y E+++S G E
Sbjct: 479 EMLIKALSDYEGTMLFVSHDRHFLAALSNRVLELTPDGIHQFGGGYTEYVESTGQE 534



 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 36/253 (14%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           +++   + + +G++ ++  +        R+ ++G NG GKST +K+++G   P  GNV+ 
Sbjct: 324 VVALKKVNKAYGSRTIYGELDFMVRRKERWCIMGVNGAGKSTLLKLVTGTTAPDSGNVTL 383

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
                 A +    FA     V+D    G   + +  +ER      P+  +          
Sbjct: 384 G-----ASVKLGYFAQHAMDVLD----GDSTILEWLEER-----FPKAGQ---------- 419

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
                + G    S         G  +E+   ++S    G K R+++A +LF  P+ ++LD
Sbjct: 420 APLRALSGCFGFS---------GDDVEKRCRVLSG---GEKARLVMAAMLFDPPNFLVLD 467

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTN+LD+DT   L   L+    TM+ +SHDRHFL ++   + +L    +  + G Y EY
Sbjct: 468 EPTNHLDLDTKEMLIKALSDYEGTMLFVSHDRHFLAALSNRVLELTPDGIHQFGGGYTEY 527

Query: 241 MTAATQARERLLS 253
           + +  Q    L S
Sbjct: 528 VESTGQEAPGLRS 540