Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  294 bits (752), Expect = 8e-84
 Identities = 167/524 (31%), Positives = 281/524 (53%), Gaps = 12/524 (2%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MI+  +++ +   + L ++ SV    G + GL+G NG GKST  +I++G+L   GG+V+ 
Sbjct: 1   MITITDLSARIAGRLLLDHASVALPAGVKAGLVGRNGAGKSTLFRIITGDLAAEGGSVTI 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
               R+ ++ Q+    EE ++I  V+   KE       R  + A  E T  D  R+A+++
Sbjct: 61  PKLARIGQVAQEAPGTEE-SLISIVLAADKE-------RSALLAEAE-TATDPHRIAEIQ 111

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
           +   ++D + AE++A  +L  +G   E      SS + GW++RV LA +LFA+PD++LLD
Sbjct: 112 MRLVDIDAHSAEARASSILAGLGFDHEAQLRPASSFSGGWRMRVALASVLFAEPDLLLLD 171

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTN LD++   WLED +     T+IIISHDR  LN+    +  LD  +L  Y G YD++
Sbjct: 172 EPTNYLDLEGTLWLEDYIRRYPHTVIIISHDRDLLNNAVNSIVHLDQKKLTFYRGGYDQF 231

Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
                +A E  +    K  A    LQ+F+ RF A A+KA+QA SR + ++++        
Sbjct: 232 ERQKAEADELQMKAKVKNDAARKHLQSFIDRFRAKATKARQAQSRIKALERMGTVAAVIE 291

Query: 301 SRQNPFIRFEQSKELFRNALIVENLSQGFD--HDLFSNFNAIFEVGERVAIIGENGVGKT 358
               P    E  K+     + +   + G++    +    N   +  +R+A++G NG GK+
Sbjct: 292 DHVQPITFPEPEKQPASPIVAINGGAVGYEPGKSILKQLNLRIDNDDRIALLGSNGNGKS 351

Query: 359 TLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVR 418
           T    ++G L P++G  + +    IG++AQ    +   D   +E + +      + Q VR
Sbjct: 352 TFAKFISGRLAPQAGDLRVASGLKIGFFAQHQLDDLVPDETPVEHVRKLMPLAPEAQ-VR 410

Query: 419 SFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNN 478
           + + +M    + +  + K LSGGE+ R+L+G    H PN+L+LDEPTNH+D++S  +L  
Sbjct: 411 ARVAQMGLATEKMSTAAKDLSGGEKARLLMGLAAFHAPNLLILDEPTNHLDIDSRRALIE 470

Query: 479 ALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
           AL  Y G +  +SHDR  +++   R+  + DG +  F+G   E+
Sbjct: 471 ALNDYSGAVILISHDRHLIEATVDRLWLVADGTVKTFEGDMEEY 514



 Score = 78.2 bits (191), Expect = 9e-19
 Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 26/220 (11%)

Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAH 392
           L  + +     G +  ++G NG GK+TL   + G L    G     + + IG  AQ+   
Sbjct: 16  LLDHASVALPAGVKAGLVGRNGAGKSTLFRIITGDLAAEGGSVTIPKLARIGQVAQEAPG 75

Query: 393 E--------FAEDLNLMEWMGQWRQEGDDEQVVR------------------SFLGRMLF 426
                     A D      + +     D  ++                    S L  + F
Sbjct: 76  TEESLISIVLAADKERSALLAEAETATDPHRIAEIQMRLVDIDAHSAEARASSILAGLGF 135

Query: 427 GQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGT 486
             +   +     SGG + R+ L  ++  +P++LLLDEPTN++D+E    L + + +Y  T
Sbjct: 136 DHEAQLRPASSFSGGWRMRVALASVLFAEPDLLLLDEPTNYLDLEGTLWLEDYIRRYPHT 195

Query: 487 LFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
           +  +SHDR  +++    I+ +   K+T ++G Y +F + +
Sbjct: 196 VIIISHDRDLLNNAVNSIVHLDQKKLTFYRGGYDQFERQK 235