Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., ABC transporter ATP-binding protein uup from Acinetobacter radioresistens SK82

 Score =  260 bits (665), Expect = 9e-74
 Identities = 178/548 (32%), Positives = 285/548 (52%), Gaps = 46/548 (8%)

Query: 2   ISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYD 61
           I+  ++   FG   L +  +     G R  LIG NG GKST +K++ G L P  G VS  
Sbjct: 4   ITLRDVQLAFGGPALLDGANFTLERGERVCLIGRNGEGKSTLLKLIEGSLLPDRGEVSIQ 63

Query: 62  PNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQ---ERDRIYALPEMTEEDGMRVAD 118
               ++ L QD    +   V D V  G  E  +V +   E      L +M   D M +  
Sbjct: 64  NGVTISMLAQD-VPMDSGKVADIVADGAGEAAQVLKDYHEASDACVLGDMEACDRMGL-- 120

Query: 119 LEVEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIML 178
           L+ +  ++DG+  E+K   +L  +G+  +     ++ ++ G K RVLLA+ L   PD++L
Sbjct: 121 LQHKMDQLDGWALENKVNNILSKMGLDPDAD---LADLSGGRKRRVLLARALLTQPDVLL 177

Query: 179 LDEPTNNLDIDTIRWLEDTL-NARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNY 237
           LDEPTN+LD+++I WLE  L +  N T++ ISHDR F++ + T + +LD G LR + GNY
Sbjct: 178 LDEPTNHLDVESIEWLEKFLMDQNNLTLLFISHDRSFVDRLATRIVELDRGTLRSFEGNY 237

Query: 238 DEYMTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEV 297
             Y+    Q  E     NA  + ++AE + ++          +Q     R  ++ ++  +
Sbjct: 238 SRYLDLKAQQLEAEEKQNALFEKKLAEEEAWI----------RQGIKARRTRNEGRVRAL 287

Query: 298 KASSRQNPFIRFEQSK------ELFRNALIV---ENLSQGFDHD-LFSNFNAIFEVGERV 347
           K    ++   RF+Q K      E  R+  +V   E+LS  +D   L  +F+AI   G+R+
Sbjct: 288 KTLREESKARRFQQGKVNMGVQEAQRSGKLVFDIEHLSVSYDDQVLIKDFSAIVLRGDRI 347

Query: 348 AIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQW 407
            ++G+NGVGKTTL+  + G + P  G  K      + Y+ Q         L+L + + + 
Sbjct: 348 GLVGDNGVGKTTLIKAILGDI-PHQGTVKVGTQLEVAYFDQ-----LRNQLDLEKSVSEN 401

Query: 408 RQEGDD-------EQVVRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLL 460
             EG D        + + S+L   LF  +  +  VK LSGGE+ R+LL KL++   N+++
Sbjct: 402 VSEGSDFVDVNGQRRHIYSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIV 461

Query: 461 LDEPTNHMDMESIESLNNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGK--ITDFKGT 518
           +DEPTN +DM ++E L   L +YKGTL  +SHDR F+D++ T    + DGK  I ++ G 
Sbjct: 462 MDEPTNDLDMVTLELLEEMLAEYKGTLLLISHDRAFMDNVVTS-TWVFDGKGHIEEYVGG 520

Query: 519 YAEFLKSR 526
           Y ++L  R
Sbjct: 521 YQDYLMQR 528