Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., ferredoxin from Magnetospirillum magneticum AMB-1

 Score =  254 bits (649), Expect = 7e-72
 Identities = 181/542 (33%), Positives = 265/542 (48%), Gaps = 53/542 (9%)

Query: 33  PTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDGEPG-------TQSNLYYADT 85
           P+V+  S G  LI+G    +      L +  ++T L + G  G           L+    
Sbjct: 118 PSVTLTSAGSVLILGRGPEVLEAARRLGAERAVTCLLLPGHDGHLVPPPVRALGLFRGKP 177

Query: 86  VEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFD-----------IVLDMSLNGLMSEEV 134
           +  SG LGAF V+V   G+    + +A G  SFD           +VLD+S  G  +   
Sbjct: 178 LRASGHLGAFKVSV---GELAGASPSARGALSFDGAVGGRDLAADLVLDLS--GEPALLA 232

Query: 135 PVPGYFPVG-RGYPKLADALEEIPTLMGTFDKPKYFRLDPDLCAHSSRGVKGCERCVDAC 193
           P  G+F +       L  AL EI  L+G F+KP++ +++  LCAHS  G   C RC+DAC
Sbjct: 233 PRDGWFKMEPNDVVALERALAEIGGLVGEFEKPRWIKVEAALCAHSRNGQVACTRCLDAC 292

Query: 194 PAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIERLLANY 253
           P+GALS +G         ++ ++C G G CA+ CPT AI + +P        +  LL  +
Sbjct: 293 PSGALSPQGDAAA-----VDAHVCGGHGPCASVCPTGAIRFDVPAGNGVYTRLSVLLETH 347

Query: 254 HQAGGEKPIVLICSSRHESYNVMALKVL-------PDNVIPVVVEELPSVGIDSWFAALV 306
             AGG  P++LI    H+     AL  L       P +VIP+ V  L ++G +    AL 
Sbjct: 348 RGAGGGSPVLLI----HDGQGAEALAALARFGDGLPADVIPMQVAALAALGPELLLTALA 403

Query: 307 NGATQVLFAAS---RHMPPTIQRILNQEMSMAQSL----LTHLGLPKETIDILYLESLRE 359
            GA +VL  A    RH    ++  +     +A+ L       L    +   I    + + 
Sbjct: 404 KGAGEVLLLADPAKRHDLDGVRAAVALANRVAEGLGWACRVRLEAEADPTAIAAFLAAKA 463

Query: 360 GMPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPSVQPLSISAPYGTIECQTSD 419
             PV   +P    L  ++G KR+ L  AL  L     A  +V PL    P+GTI    + 
Sbjct: 464 PRPV---EPAAEFL--VLGGKRQTLGLALTHLHRHAPAPVAVLPLEAGDPFGTIAVDQAK 518

Query: 420 CTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAAR 479
           CTLCM+CV+ CP +AL    D P+L  +E +CVQCGLC   CPE+ +S  P+L +   AR
Sbjct: 519 CTLCMACVSACPAKALSGHPDKPSLGILEVNCVQCGLCRVTCPEKAVSLLPRLAFGSEAR 578

Query: 480 QGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDCRVVDM 539
              V L +EEP +C+RC KPFA +S+I  +  ++  H+ F     L+ I MCEDCRVV  
Sbjct: 579 LRQV-LKEEEPYECIRCGKPFASKSVIERMTERMSNHAMFKGTGKLDLIKMCEDCRVVAQ 637

Query: 540 FE 541
           ++
Sbjct: 638 YQ 639