Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., periplasmic nitrate reductase, ferredoxin-like protein from Agrobacterium fabrum C58

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 409 PYGTIECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSA 468
           P G      + C+ C  CV  CPT  + + G  P++ F   +C  CG C +ACPE V  A
Sbjct: 25  PPGVALSDLAACSGCAKCVEACPTGIITMVGGLPSVNFSAGECTFCGKCAQACPEPVF-A 83

Query: 469 TP 470
           TP
Sbjct: 84  TP 85



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 173 PDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACP 228
           P +         GC +CV+ACP G ++  G   +   +  +   C   G CA ACP
Sbjct: 26  PGVALSDLAACSGCAKCVEACPTGIITMVGGLPS---VNFSAGECTFCGKCAQACP 78



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)

Query: 423 CMSCVAVCPTRALHLA---GDSPALRFIEQDCVQCGLCVKACPEQVL 466
           C +C   CPT A+      G       +E  C  CG CV  CP  V+
Sbjct: 108 CQACRDACPTEAIRFRPRRGGPFVPALVEDACTGCGACVSVCPVGVI 154



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 186 CERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGT-----CATACPTEAIHY 234
           C +C  ACP    ++  +    H + I    C   G      C  ACPTEAI +
Sbjct: 70  CGKCAQACPEPVFATPDAHSFDHVMAIGEG-CLAFGNVDCQACRDACPTEAIRF 122



 Score = 30.4 bits (67), Expect = 5e-05
 Identities = 14/47 (29%), Positives = 18/47 (38%)

Query: 186 CERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAI 232
           C+ C DACP  A+             +    C G G C + CP   I
Sbjct: 108 CQACRDACPTEAIRFRPRRGGPFVPALVEDACTGCGACVSVCPVGVI 154



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 420 CTLCMSCVAVCPTRALHL 437
           CT C +CV+VCP   + +
Sbjct: 139 CTGCGACVSVCPVGVIKI 156



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 185 GCERCVDACPAGAL 198
           GC  CV  CP G +
Sbjct: 141 GCGACVSVCPVGVI 154