Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1021 a.a., formate dehydrogenase-N subunit alpha from Pseudomonas sp. SVBP6

 Score =  253 bits (646), Expect = 4e-71
 Identities = 277/1089 (25%), Positives = 438/1089 (40%), Gaps = 224/1089 (20%)

Query: 17   LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCG 76
            + ++RR F K  ++  GG+++ A    P      Q     + A T+  R  C +CSVGCG
Sbjct: 1    MDLNRRQFFKVAAVGLGGSSLAALGMAPTPAFAEQVRHF-KLAHTKETRNTCPYCSVGCG 59

Query: 77   I--YAEVQNGVWTGQ-----EPAFDHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG- 128
            +  Y++        Q     E   DHP N G  C KGA L +  H   RL+YP   + G 
Sbjct: 60   LIMYSQGDAAKNVAQNIIHIEGDADHPVNRGTLCPKGAGLLDFIHSPSRLQYPQVRKAGS 119

Query: 129  -KWKKISWEQAINEIGDKALKIREESGPD------------SVYFLGSAKHSNEQAYLFR 175
             +W +ISW+ A++ + D     R+ +  +            SV FL ++  SNE  Y+  
Sbjct: 120  NEWTRISWDDALDRVADLMKADRDANFIEKNAQGQTVNRWLSVGFLAASASSNEAGYMTH 179

Query: 176  KMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHP 235
            K+    G    D+QAR+ H  TVA +A T+G GAMTN + D+ N   +L +G N AEAHP
Sbjct: 180  KVIRSLGMLGFDNQARVUHGPTVASLAPTYGRGAMTNHWTDIANANLILVMGGNAAEAHP 239

Query: 236  VAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGV---------LW 286
               + +  AK  N  +++V DPR TRTA+ ADY+  +R GSD+AF+ G+         + 
Sbjct: 240  CGFKWVTEAKAHNKARLIVVDPRFTRTASVADYYAPIRTGSDIAFMGGLINFLLSNDKIQ 299

Query: 287  HVFKNNWEDKEYIRQRVFGMDE-------------------------------------- 308
            H +  N+ D  +I +  F  ++                                      
Sbjct: 300  HEYVRNYTDVSFIVKAGFSFEDGLFSGYDAAKRSYTDKSGWGYEIGEDGFAKVDPTLQDP 359

Query: 309  ------IRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAE-NRPG---CVVWCMGGTQHTT 358
                  ++   +++T     ++ G+  + +    + +A  ++PG    +++ +G TQH+ 
Sbjct: 360  RCVYQLMKQHYSRYTLELASQICGMPADSMRKIWEEIATCSQPGKTMTILYALGWTQHSI 419

Query: 359  GNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYY--------- 409
            G+   R+  +++L LGN+G  GGG N  RGH N+QG TDLG+LS+ LPGY          
Sbjct: 420  GSQIIRSAAMVQLLLGNVGMPGGGVNALRGHSNIQGLTDLGLLSNLLPGYLTLPADAEQD 479

Query: 410  -----------GLTEGSWKHWASVWGVDFEWIKNRFDQGT-------YNGALPMETPGIP 451
                        L  G   +W +        +K  +           Y+    ++ PG  
Sbjct: 480  YNAYIAKRAPKALRPGQLSYWQNYGKFHVSLMKAWYGANATVENNWGYDYLPKLDIPGYD 539

Query: 452  VSRWIDGVLENKDNLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTV 510
            V +  D        +  +E +   F  G + + +      +  A+ KL  +V++DP  T 
Sbjct: 540  VLKMFD--------MMAKEQVNGYFCQGFNPIAALPDKNRVTAALSKLKWLVVMDPLATE 591

Query: 511  AA-------------VMNDRTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESK 557
             +               N +T+ V  LP T   E  GS+  S+R +QW  +  E   +++
Sbjct: 592  TSEFWRNAGPFNDVETANIQTE-VIRLPTTCFAEEDGSLVNSSRWLQWHWKGAEGPGQAR 650

Query: 558  PDHEIMYLLSQKLGIADQLCKHIRVEN-----------NQPLIEDITREFNRGMWTIGYT 606
             D  IM  L  +L    Q       E+            +P  E+I +EF+ G      T
Sbjct: 651  TDVRIMSELFLRLRERYQRDGGAWAESILKLNWPYKVPEEPTPEEIAKEFS-GYAVADVT 709

Query: 607  GQSPERLKTHQQNWHTFHKTTLAAEGGPAHGDTYGMPWPCWGTPEMKHPGTHILYDTSKT 666
              S   +K  QQ         L  +G  A G        CW            ++  S T
Sbjct: 710  DASGALVKAGQQ---LAGFAQLKDDGSTASG--------CW------------IFSGSWT 746

Query: 667  VAEGGGNFRTRFGVEFEGKS----------LLAEDSYSKGCELQDGYPEFSDKLLKQLGW 716
              E G     R   +  G            +     Y++      G P   +   K+L W
Sbjct: 747  --EQGNQMARRDNADPYGMKQNLGWAWAWPMNRRILYNRASADPQGKPWAPN---KRLVW 801

Query: 717  WDDLTAEEKAAAEGKNW-KTDLSGGIQRVAIKHGCIPF-----GNAKARAIVWTFPDRVP 770
            W+           GK W  TD+       A + G  PF     G A+  A+        P
Sbjct: 802  WN-----------GKAWGGTDVPDFKVDAAPESGMNPFIMNPEGVARFFALDKMAEGPFP 850

Query: 771  LHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSI-QAQDKSVEYPIILTSGRLVEYEG 829
             H EP  TP   +   +P  + QA       ++ S+  +  ++ ++P   TS RL E+  
Sbjct: 851  EHYEPFETP-IGINPLHPN-NKQATSNPAGRVFDSVWDSLGQAKDFPYAATSYRLTEHFH 908

Query: 830  GGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKP 889
                T+  P  A  Q E FVE+    A + G   GD V V   ++G I+  A+VT+R++P
Sbjct: 909  FW--TKHCPINAVTQPEQFVEIGEALAKEKGIAAGDRVRV-SCKRGHIEAVAVVTKRIRP 965

Query: 890  --------GMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQET 941
                        +P H+G  F G                G   NT   +  D  T   E+
Sbjct: 966  LQVNNQTVHQIGIPLHWG--FTGVTRH------------GYLTNTLVPFLGDGNTQTPES 1011

Query: 942  KVTLCNIRK 950
            K  L N+ K
Sbjct: 1012 KSFLVNVEK 1020