Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 965 a.a., formate dehydrogenase subunit alpha from Pseudomonas protegens RBAN4

 Score =  187 bits (476), Expect = 2e-51
 Identities = 150/575 (26%), Positives = 263/575 (45%), Gaps = 52/575 (9%)

Query: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKA-------QASEVDRSAKTEVKRTICS 69
           L IS R F    + A G   + +   + G   +A       + S V          T C+
Sbjct: 195 LTISGRGFESRVAAAGGDNFLDSECVSCGACVQACPTATLMEKSVVQMGQPERAVITTCA 254

Query: 70  HCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKYPM--KLEG 127
           +C VGC   AE++        P  +   N G  C KG     +     R+  PM  K   
Sbjct: 255 YCGVGCSFRAEMKGDQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRITKPMIRKHIS 314

Query: 128 GKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRKMA-SLWGTNNV 186
             W+++SW++A++    +  +I+ + G DS+  + S++ +NE+ YL +K+  + +G NNV
Sbjct: 315 DPWQEVSWDEAVSYAASELRRIQFKYGRDSIGGITSSRCTNEETYLVQKLVRAAFGNNNV 374

Query: 187 DHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQHILIAKE 246
           D  AR+CHS T  G+  T G  A T SF+ +     +L +G+NP++AHPV     L  + 
Sbjct: 375 DTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVILVMGANPSDAHPVFGSQ-LKRRL 433

Query: 247 KNSCKIVVADPRRTRTA----AKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEYIRQR 302
           +   K++V DPRR        A+A+  ++LRPG++VA +  +   +      D+E++  R
Sbjct: 434 REGAKLIVIDPRRIDLVDSVHARAELHLALRPGTNVAMLNALAHVIVTEGLVDQEFVSAR 493

Query: 303 ----VFGMDEIRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGGTQHTT 358
                F +       A  +P  +  + GV   ++   A+  A      + + +G T+H+ 
Sbjct: 494 CEPEAFALWSAFVSRADNSPEVLGAICGVPAADIRAAARLYATGGNAAIYYGLGVTEHSQ 553

Query: 359 GNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKH 418
           G+ +      L +A GNIG+ G G N  RG +NVQG+ D+G     LPGY        +H
Sbjct: 554 GSTSVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGY--------RH 605

Query: 419 WASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQRENIRAMFYW 478
                 +  + ++ +F+Q  +N  L  + PG+ +    +  L          + + ++  
Sbjct: 606 ------ISNQAVRQQFEQ-AWNVTLQAD-PGLRIPNMFEAALGG--------SFKGLYCQ 649

Query: 479 GHAV-NSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYL-LPATTQFETYGSV 536
           G  +  S      +  A+  ++ +V+ D +      +N+     ++ LP ++  E  G+ 
Sbjct: 650 GEDIAQSDPNTQHVTAALSAMECVVVQDIF------LNETAKFAHVFLPGSSFLEKDGTF 703

Query: 537 TASNRSIQWRDQVIEPLFESKPDHEIMYLLSQKLG 571
           T + R I    +V+EPL   K D E    L+  LG
Sbjct: 704 TNAERRISRVRKVMEPL-GGKADWEGTLALAAALG 737



 Score = 59.3 bits (142), Expect = 1e-12
 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 23/136 (16%)

Query: 815 YPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEK 874
           YP++LT+GR++     G +TR    +A   ++  +E++P DA   G  +GD V + G+  
Sbjct: 816 YPLLLTTGRILSQYNVGAQTRRTDNVAWHAEDR-LEIHPTDAESRGINEGDWVGI-GSRA 873

Query: 875 GRIKVKAMVTRRVKPGMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDP 934
           G+  ++A VT RV PG+ +  FHF             PE          AN  TT   D 
Sbjct: 874 GQTVLRARVTERVAPGVVYTTFHF-------------PE--------SGANVITTDNSDW 912

Query: 935 VTLMQETKVTLCNIRK 950
            T   E KVT   + +
Sbjct: 913 ATNCPEYKVTAVEVSR 928