Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 891 a.a., formate dehydrogenase subunit alpha from Magnetospirillum magneticum AMB-1

 Score =  196 bits (499), Expect = 4e-54
 Identities = 153/547 (27%), Positives = 257/547 (46%), Gaps = 59/547 (10%)

Query: 43  TPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGH 102
           T  ++  A    V+RS  +     +C +C VGC +   V  G   G +   D   N    
Sbjct: 197 TGALLPAAGPVRVERSVDS-----LCPYCGVGCQVTYHVAGGDIVGAKGR-DGEANHQRL 250

Query: 103 CAKGAALREHGHGERRLKYPMKLEGGKWKK-------------ISWEQAINEI--GDKAL 147
           C KG    ++    +RL  P+  + G  K+              SW++A++    G K L
Sbjct: 251 CVKGRFGFDYSRHPQRLTVPLIRKEGAPKEPLDPADPFTHFRPASWDEALDAAAAGLKRL 310

Query: 148 KIREESGPDSVYFLGSAKHSNEQAYLFRKMASL-WGTNNVDHQARICHSTTVAGVANTWG 206
                +G      LGSAK SNE+AYLF+K+    + +NNVDH  R+CH+++VA +    G
Sbjct: 311 PASALAG------LGSAKGSNEEAYLFQKLVRTGFKSNNVDHCTRLCHASSVAALLEGIG 364

Query: 207 YGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQHILIAKEKNSCKIVVADPRRTRTAAKA 266
            GA+T    ++ N + ++ IG+NP+  HPVA   I  A  K   ++V+ DPR       A
Sbjct: 365 SGAVTAPVAEVANAEVIVLIGANPSANHPVAASFIKNAV-KGGAQLVILDPRGQALTRFA 423

Query: 267 DYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEYIRQRVFGMDEIRAEVAKWTPAEVERVTG 326
            + +    G+DVA +  +L  +      D+++++ R  G  E+   +  + P  +  + G
Sbjct: 424 SHHLKFNNGTDVALLNAMLHVIVAEELYDRDFVQARTTGFAELAQHLKSYAPEAMAPLCG 483

Query: 327 VSEEEVYNTAKTLAENRPGCVVWCMGGTQHTTGNNNTRAYCILELALGNIGKSGGGANIF 386
           +    +   A+  A      ++W MG +QH+ G +N+R    L L  G++G+ G G +  
Sbjct: 484 IDAGTIRVVARLYARAASAMILWGMGVSQHSHGTDNSRCLIALALLCGHVGRPGSGLHPL 543

Query: 387 RGHDNVQGATDLGVLSDTLPGYYGLTEGSWKHWASVWGVDFEWIKNRFDQGTYNGALPME 446
           RG +NVQGA+D G++   LP Y                V  + ++ RF+ G   G     
Sbjct: 544 RGQNNVQGASDAGLIPMMLPDY--------------GRVGLDAVRQRFEAGW--GVELDP 587

Query: 447 TPGIPVSRWIDGVLENKDNLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVD 505
             G+ V   +D          Q   IR ++  G +   S       ++A+  L+ +V+ D
Sbjct: 588 DSGLTVVEMMDAA--------QAGIIRGLYVEGENPAMSDPDLAHARQALAGLEHLVVQD 639

Query: 506 PYPTVAAVMNDRTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYL 565
            + T  A++ D      +LPA++ FE  GS T ++R IQ   QVI+P  E++ D  I+  
Sbjct: 640 IFLTETAMLAD-----VVLPASSFFEKTGSFTNTDRHIQMGRQVIDPPGEARSDLWIITE 694

Query: 566 LSQKLGI 572
           + ++LG+
Sbjct: 695 MGRRLGL 701



 Score = 61.2 bits (147), Expect = 3e-13
 Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 25/158 (15%)

Query: 787 YPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYEGGGEETRSNPWLAELQQE 846
           +PT D +A +     L     A++   +YP +L++GR++E+   G  TR +  L  LQ  
Sbjct: 750 FPTGDGKARLVPASGL---APAENPDADYPFLLSTGRVLEHWHTGSMTRRSDVLDRLQGL 806

Query: 847 MFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKPGMAFLPFHFGGKFQGED 906
             V V+P D   LG  +G  V +E + +G ++  A+   R+ PG  FLPF F        
Sbjct: 807 PAVNVSPGDMARLGLAEGARVRLE-SRRGAVEAAAVADSRLSPGALFLPFCF-------- 857

Query: 907 LRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQETKVT 944
                           AAN  T    DPV  + E KV+
Sbjct: 858 -------------TEAAANLLTNPALDPVAKIPELKVS 882