Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1015 a.a., Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  247 bits (630), Expect = 3e-69
 Identities = 201/688 (29%), Positives = 306/688 (44%), Gaps = 125/688 (18%)

Query: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCG 76
           + +SRR F K  +    G  V A  FTP M   AQA         E++ + C++CSVGCG
Sbjct: 1   MDVSRRQFFKICAGGMAGTTVAALGFTPKMAL-AQARNYKLLRAKEIRNS-CTYCSVGCG 58

Query: 77  IYA-EVQNGVWTGQEPAF------DHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG- 128
           +    + +G    +E  +      DHP + G  C KGA L ++ H E RL+YP     G 
Sbjct: 59  LLMYSLGDGAKNAKEAIYHIEGDPDHPVSRGALCPKGAGLLDYVHSEDRLRYPEYRAPGS 118

Query: 129 -KWKKISWEQAINEIGDKALKI--------REESGPD-----SVYFLGSAKHSNEQAYLF 174
            KW++ISW+ A   I  K +K         + E G       S   L ++  SNE   L 
Sbjct: 119 DKWQRISWDDAFTRIA-KLMKADRDANFIEKNEQGVTVNRWLSTGMLCASAASNETGMLT 177

Query: 175 RKMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAH 234
           +K A   G   VD+QAR+ H  TVA +A T+G GAMTN + D+ N   ++ +G N AEAH
Sbjct: 178 QKFARSLGMLAVDNQARV*HGPTVASLAPTFGRGAMTNHWVDIKNANVVMVMGGNAAEAH 237

Query: 235 PVAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWE 294
           PV  +  + AK  N   ++V DPR TRTA+ AD +  +R G+D+ F+ GVL ++ +NN  
Sbjct: 238 PVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIRSGTDITFLSGVLLYLIENNKI 297

Query: 295 DKEYIRQRV---------FGMDE------------------------------------- 308
           + EY++            F  D+                                     
Sbjct: 298 NAEYVKHYTNASLLVRDDFAFDDGLFSGYDAQKRQYDKSSWNYQFDENGYAKRDETLTHP 357

Query: 309 ------IRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAE----NRPGCVVWCMGGTQHTT 358
                 ++  V+++TP  VE + G  + +     + LA     +R    ++ +G TQHT 
Sbjct: 358 RCVWNLLKQHVSRYTPDVVENICGTPKADFLKVCEVLASTSVPDRTTTFLYALGWTQHTV 417

Query: 359 GNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKH 418
           G  N R   +++L LGN+G +GGG N  RGH N+QG TDLG+LS +LPGY  L       
Sbjct: 418 GAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSTSLPGYLTLPSEKQAD 477

Query: 419 WASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKD-------------- 464
             +    +        DQ  Y G  P     +  S + D   +  D              
Sbjct: 478 LQTYLAANTP-KATLADQVNYWGNYPKFFVSLMKSFYGDAAQQENDWGFAWLPKWDQSYD 536

Query: 465 -----NLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVM---- 514
                N+     +   F  G + V S     ++ +++ KL  +V++DP  T  +      
Sbjct: 537 VIKYFNMMDSGKVTGYFCQGFNPVASFPDKNKVVQSLSKLKYLVVIDPLVTETSTFWQNH 596

Query: 515 ---ND------RTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYL 565
              ND      +T+ V+ LP+T   E  GS+  S R +QW  +  +   E++ D EI+  
Sbjct: 597 GESNDVDPTTIQTE-VFRLPSTCFAEEDGSIANSGRWLQWHWKGQDAPGEARNDGEIL-- 653

Query: 566 LSQKLGIADQLCKHIRVENN---QPLIE 590
                GI  +L +  R E     +PL++
Sbjct: 654 ----AGIYHRLREMYRAEGGKGAEPLLK 677



 Score = 38.5 bits (88), Expect = 2e-06
 Identities = 52/190 (27%), Positives = 76/190 (40%), Gaps = 29/190 (15%)

Query: 770  PLHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYEG 829
            P H EP+ TP    L   P   +           +      K  ++P + T+ RL E+  
Sbjct: 847  PEHYEPMETP----LGTNPLHPNVVSNPAARLYEEDALRMGKKEQFPYVGTTYRLTEHFH 902

Query: 830  GGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKP 889
                T+     A  Q E FVE++   A   G  +GD V V  +++G I+  A+VTRR++ 
Sbjct: 903  TW--TKHALLNAIAQPEQFVEISETLAAAKGIANGDYVKV-SSKRGFIRAVAVVTRRLRT 959

Query: 890  --------GMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQET 941
                        +P H+G  F+G   +            G  ANT T    D  +   E 
Sbjct: 960  LHVNGQQVETVGIPIHWG--FEGVARK------------GYIANTLTPNVGDANSQTPEY 1005

Query: 942  KVTLCNIRKA 951
            K  L NI KA
Sbjct: 1006 KAFLVNIEKA 1015