Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1016 a.a., Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  239 bits (611), Expect = 5e-67
 Identities = 185/636 (29%), Positives = 291/636 (45%), Gaps = 112/636 (17%)

Query: 19  ISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCGIY 78
           +SRR F K  +    G    A  F PG +  A+  +  +  +T   R  C++CSVGCG+ 
Sbjct: 3   VSRRQFFKICAGGMAGTTAAALGFAPG-VALAETRQY-KLLRTRETRNTCTYCSVGCGLL 60

Query: 79  A-EVQNGVWTGQEPAF------DHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG--K 129
              + +G    +   F      DHP + G  C KGA L +  H E RLK+P     G  K
Sbjct: 61  MYSLGDGAKNAKASIFHIEGDPDHPVSRGALCPKGAGLVDFIHSESRLKFPQYRAPGSDK 120

Query: 130 WKKISWEQAINEIG-------DKALKIREESGPD-----SVYFLGSAKHSNEQAYLFRKM 177
           W++ISWE+A + I        D   + +   G       +   L ++  SNE  YL +K 
Sbjct: 121 WQQISWEEAFDRIAKLMKEDRDANYQAQNAEGVTVNRWLTTGMLCASASSNETGYLTQKF 180

Query: 178 ASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVA 237
           +   G   VD+QAR+ H  TVA +A T+G GAMTN + D+ N   ++ +G N AEAHPV 
Sbjct: 181 SRALGMLAVDNQARV*HGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVG 240

Query: 238 MQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKE 297
            +  + AK  N  K++V DPR TRTA+ AD++  +R G+D+AF+ GV+ ++  N   ++E
Sbjct: 241 FRWAMEAKIHNGAKLIVIDPRFTRTASVADFYAPIRSGTDIAFLSGVMLYLLTNEKYNRE 300

Query: 298 Y---------IRQRVFGMDE---------------------------------------- 308
           Y         I +  FG D+                                        
Sbjct: 301 YTEAYTNASLIVREDFGFDDGLFTGYDADKRQYDKTSWHYELDENGFAKHDTTLQHPRCV 360

Query: 309 ---IRAEVAKWTPAEVERVTGVSEEEVYNT----AKTLAENRPGCVVWCMGGTQHTTGNN 361
              ++  V+++TP  VE + G  + +        A+T A+++    ++ +G TQH+ G  
Sbjct: 361 WNLLKQHVSRYTPDMVENICGTPKADFLKVCEYIAETSAKDKTASFLYALGWTQHSIGAQ 420

Query: 362 NTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGS------ 415
           N R   +++L LGN+G +GGG N  RGH N+QG TDLG+LS +LPGY  L          
Sbjct: 421 NIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYLTLPSEKQTDLQT 480

Query: 416 ----------WKHWASVWGVDFEWIKNRFDQGTYNGALPMETPGIP-VSRWIDG--VLEN 462
                      K   + WG   ++  +       + A    + G   + +W  G  VL+ 
Sbjct: 481 YLAANTPKPLLKDQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQY 540

Query: 463 KDNLQQRENIRAMFYWGHAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVM-------N 515
            + ++Q +    +    + V S     ++  ++ KL  +V +DP  T  +         N
Sbjct: 541 FEMMKQGKVNGYICQGFNPVASFPNKNKVVASLSKLKYLVTIDPLNTETSTFWQNHGESN 600

Query: 516 D------RTDGVYLLPATTQFETYGSVTASNRSIQW 545
           D      +T+ V+ LP+T   E  GS+  S R +QW
Sbjct: 601 DVDPAKIQTE-VFRLPSTCFAEENGSIVNSGRWLQW 635



 Score = 48.5 bits (114), Expect = 2e-09
 Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 31/190 (16%)

Query: 770  PLHREPLYTPR-RDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYE 828
            P H EP  TP   + L      +  A IF+         A  K+ ++P + T+ RL E+ 
Sbjct: 848  PEHYEPFETPLGTNPLHPNVISNPAARIFK-----DDADALGKADKFPYVGTTYRLTEHF 902

Query: 829  GGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVK 888
                 T+     A  Q E FVE+  K AN LG   GD V V  + +G IK KA+VT+R++
Sbjct: 903  HYW--TKHALLNAIAQPEQFVEIGEKLANKLGIAHGDTVKV-SSNRGYIKAKAVVTKRIR 959

Query: 889  PGMA--------FLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQE 940
               A         +P H+G  ++G   +            G  ANT T +  D  T   E
Sbjct: 960  TLKADGKDIDTIGIPIHWG--YEGVAKK------------GFIANTLTPFVGDANTQTPE 1005

Query: 941  TKVTLCNIRK 950
             K  L N+ K
Sbjct: 1006 FKSFLVNVEK 1015