Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1015 a.a., formate dehydrogenase-N, alpha subunit, nitrate-inducible (NCBI) from Escherichia coli BW25113

 Score =  242 bits (617), Expect = 1e-67
 Identities = 197/659 (29%), Positives = 296/659 (44%), Gaps = 118/659 (17%)

Query: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCG 76
           + +SRR F K  +    G  V A  F P     AQA         E++ T C++CSVGCG
Sbjct: 1   MDVSRRQFFKICAGGMAGTTVAALGFAPKQAL-AQARNYKLLRAKEIRNT-CTYCSVGCG 58

Query: 77  IYA-EVQNGVWTGQEPAF------DHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG- 128
           +    + +G    +E  +      DHP + G  C KGA L ++ + E RL+YP     G 
Sbjct: 59  LLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVNSENRLRYPEYRAPGS 118

Query: 129 -KWKKISWEQAINEIGDKALKI--------REESGPD-----SVYFLGSAKHSNEQAYLF 174
            KW++ISWE+A + I  K +K         + E G       S   L ++  SNE   L 
Sbjct: 119 DKWQRISWEEAFSRIA-KLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLT 177

Query: 175 RKMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAH 234
           +K A   G   VD+QAR+ H  TVA +A T+G GAMTN + D+ N   ++ +G N AEAH
Sbjct: 178 QKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANVVMVMGGNAAEAH 237

Query: 235 PVAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWE 294
           PV  +  + AK  N   ++V DPR TRTA+ AD +  +R G+D+ F+ GVL ++ +NN  
Sbjct: 238 PVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIRSGTDITFLSGVLRYLIENNKI 297

Query: 295 DKEYIRQRV---------------------------------FGMDE------------- 308
           + EY++                                    + +DE             
Sbjct: 298 NAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYDKSSWNYQLDENGYAKRDETLTHP 357

Query: 309 ------IRAEVAKWTPAEVERVTGVSEEEVYNT----AKTLAENRPGCVVWCMGGTQHTT 358
                 ++  V+++TP  VE + G  + +        A T A +R    ++ +G TQHT 
Sbjct: 358 RCVWNLLKEHVSRYTPDVVENICGTPKADFLKVCEVLASTSAPDRTTTFLYALGWTQHTV 417

Query: 359 GNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKH 418
           G  N R   +++L LGN+G +GGG N  RGH N+QG TDLG+LS +LPGY  LT  S K 
Sbjct: 418 GAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSTSLPGY--LTLPSEKQ 475

Query: 419 WASVWGVDFEWIKNRF-DQGTYNGALPMETPGIPVSRWIDGVLENKD------------- 464
                 ++    K    DQ  Y    P     +  S + D   +  +             
Sbjct: 476 VDLQSYLEANTPKATLADQVNYWSNYPKFFVSLMKSFYGDAAQKENNWGYDWLPKWDQTY 535

Query: 465 ------NLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVM--- 514
                 N+     +   F  G + V S     ++   + KL  MV++DP  T  +     
Sbjct: 536 DVIKYFNMMDEGKVTGYFCQGFNPVASFPDKNKVVSCLSKLKYMVVIDPLVTETSTFWQN 595

Query: 515 ----ND------RTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIM 563
               ND      +T+ V+ LP+T   E  GS+  S R +QW  +  +   E++ D EI+
Sbjct: 596 HGESNDVDPASIQTE-VFRLPSTCFAEEDGSIANSGRWLQWHWKGQDAPGEARNDGEIL 653



 Score = 43.5 bits (101), Expect = 7e-08
 Identities = 55/190 (28%), Positives = 78/190 (41%), Gaps = 29/190 (15%)

Query: 770  PLHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYEG 829
            P H EP+ TP    L   P   +      V    +      K  ++P + T+ RL E+  
Sbjct: 847  PEHYEPIETP----LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFH 902

Query: 830  GGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKP 889
                T+     A  Q E FVE++   A   G  +GD V V  +++G I+  A+VTRR+KP
Sbjct: 903  TW--TKHALLNAIAQPEQFVEISETLAAAKGINNGDRVTVS-SKRGFIRAVAVVTRRLKP 959

Query: 890  --------GMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQET 941
                        +P H+G  F+G   +            G  ANT T    D  +   E 
Sbjct: 960  LNVNGQQVETVGIPIHWG--FEGVARK------------GYIANTLTPNVGDANSQTPEY 1005

Query: 942  KVTLCNIRKA 951
            K  L NI KA
Sbjct: 1006 KAFLVNIEKA 1015