Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1015 a.a., formate dehydrogenase (quinone-dependent) catalytic subunit from Enterobacter asburiae PDN3

 Score =  245 bits (625), Expect = 1e-68
 Identities = 200/688 (29%), Positives = 308/688 (44%), Gaps = 125/688 (18%)

Query: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCG 76
           + +SRR F K  +    G       F P M   AQA         E++ T C++CSVGCG
Sbjct: 1   MDVSRRQFFKICAGGMAGTTAAMLGFAPKMAL-AQARNYKLLRAKEIRNT-CTYCSVGCG 58

Query: 77  IYA-EVQNGVWTGQEPAF------DHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG- 128
           ++   + +G    +E  +      DHP + G  C KGA L ++ H E RL+YP     G 
Sbjct: 59  LFMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVHSENRLRYPEYRAPGS 118

Query: 129 -KWKKISWEQAINEIG-----DKALKIREESGPD-------SVYFLGSAKHSNEQAYLFR 175
            KW++ISW++A + I      D+     E++          S   L ++  SNE   L +
Sbjct: 119 DKWQRISWDEAFSRIAKLMKADRDANFIEKNAQGVTVNRWLSTGMLCASAASNETGMLTQ 178

Query: 176 KMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHP 235
           K     G   VD+QAR+ H  TVA +A T+G GAMTN + D+ N   ++ +G N AEAHP
Sbjct: 179 KFVRSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANVVVVMGGNAAEAHP 238

Query: 236 VAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWED 295
           V  +  + AK  N   ++V DPR TRTA+ AD +  +R G+D+ F+ GVL ++ +NN  +
Sbjct: 239 VGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIRSGTDITFLSGVLLYLIENNKIN 298

Query: 296 KEYIRQRV---------FGMDE-------------------------------------- 308
            EY++            F  D+                                      
Sbjct: 299 AEYVKHYTNANLLVRDDFAFDDGLFSGYDAEKRQYDKTSWNYQFDENGYAMRDETLTHPR 358

Query: 309 -----IRAEVAKWTPAEVERVTGVSEEEVYNT----AKTLAENRPGCVVWCMGGTQHTTG 359
                ++  V+++TP  VE + G  + +        A T A +R    ++ +G TQHT G
Sbjct: 359 CVWNLLKQHVSRYTPDVVENICGTPKADFLKVCEVLASTSAADRTTTFLYALGWTQHTVG 418

Query: 360 NNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKHW 419
             N R   +++L LGN+G +GGG N  RGH N+QG TDLG+LS +LPGY  LT  S K  
Sbjct: 419 AQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSTSLPGY--LTLPSEKQA 476

Query: 420 ASVWGVDFEWIKNRF-DQGTYNGALPMETPGIPVSRWIDGVLENKD-------------- 464
                ++    K    DQ  Y    P     +  S + D   +  D              
Sbjct: 477 DLQTYLEANTPKATLPDQVNYWSNYPKFYVSLMKSFYGDAAQKENDWGFEWLPKWDQAYD 536

Query: 465 -----NLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVM---- 514
                N+  + ++      G + V S     ++ +++ KL  MV++DP  T  +      
Sbjct: 537 VIKYFNMMDKGSVTGYICQGFNPVASFPDKNKVVRSLSKLKYMVVIDPLVTETSTFWQNH 596

Query: 515 ---ND------RTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYL 565
              ND      +T+ V+ LP+T   E  GS+  S R +QW  +  +   E++ D EI+  
Sbjct: 597 GESNDVDPASIQTE-VFRLPSTCFAEEDGSIANSGRWLQWHWKGQDAPGEARNDGEIL-- 653

Query: 566 LSQKLGIADQLCKHIRVENN---QPLIE 590
                GI  +L +  R E     +PL++
Sbjct: 654 ----AGIYHRLREMYRTEGGKGAEPLLK 677



 Score = 41.6 bits (96), Expect = 3e-07
 Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 31/191 (16%)

Query: 770  PLHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVE-YE 828
            P H EP+ TP    L   P   +      V    + +    K  ++P + T+ RL E + 
Sbjct: 847  PEHYEPMETP----LGTNPLHPNVISSPVVRIYEEDVLRLGKKDKFPYVGTTYRLTEHFH 902

Query: 829  GGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVK 888
               +  R N   A  Q E FVE++   A   G  +GD V V  +++G I+  A+VTRR++
Sbjct: 903  TWTKHARLN---AIAQPEQFVEISETLAKAKGIANGDRVKV-SSKRGFIRAVAVVTRRLQ 958

Query: 889  P--------GMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQE 940
                         +P H+G  F+G   +            G  ANT T    D  +   E
Sbjct: 959  SLNVHGQQVETVGIPLHWG--FEGVAQK------------GYIANTLTPNVGDSNSQTPE 1004

Query: 941  TKVTLCNIRKA 951
             K  L NI KA
Sbjct: 1005 YKAFLVNIEKA 1015