Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1015 a.a., formate dehydrogenase-N subunit alpha from Dickeya dianthicola ME23

 Score =  234 bits (596), Expect = 3e-65
 Identities = 207/713 (29%), Positives = 300/713 (42%), Gaps = 151/713 (21%)

Query: 19  ISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVD-RSAKTEVKRTICSHCSVGCGI 77
           ++RR F K  +    G  +    FTP    +A AS    +  + +  R  C++CSVGCG+
Sbjct: 3   VNRRGFFKVCAGGMAGTTLAVLGFTP---TEAMASVRQYKLLRAKETRNNCTYCSVGCGL 59

Query: 78  YA-EVQNGVWTGQEPAF------DHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG-- 128
               + +G    +   F      DHP + G  C KGA L ++ H E RLKYP     G  
Sbjct: 60  LMYSLGDGAKNAKPSIFHIEGDPDHPVSRGSLCPKGAGLVDYIHSEGRLKYPEYRAPGSD 119

Query: 129 KWKKISWEQAINEIGDKALKIREESGPD------------SVYFLGSAKHSNEQAYLFRK 176
           KW++ISW+ AI  I     K R+ +               +   L S+  SNE   L +K
Sbjct: 120 KWQRISWDDAIERIARLMKKDRDANFERLNAKGALVNRWLTTGMLCSSAASNETGVLDQK 179

Query: 177 MASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPV 236
            A   G   +D QAR+CH  TVA +A T+G GAMTN++ D+ N   ++ +G N AEAHPV
Sbjct: 180 FARSLGMVAIDCQARLCHGPTVAALAPTFGRGAMTNNWVDIKNANVIIVMGGNAAEAHPV 239

Query: 237 AMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDK 296
             +  + AK  N  K++V DPR  R+AA AD +  +R GSD AF+ GV+ ++  ++    
Sbjct: 240 GFKWAVEAKTHNDAKLIVVDPRFNRSAAVADLYAPIRAGSDAAFLLGVVNYLITHDKIHH 299

Query: 297 EYIR---------QRVFGMDE--------------------------------------- 308
           EY++         +  F  DE                                       
Sbjct: 300 EYVKSYTSASLIVREDFSFDEGLFSGYNSQTHQYDKSSWQYELGADGFAKRDMTLSHPRC 359

Query: 309 ----IRAEVAKWTPAEVERVTGVS----EEEVYNTAKTLAENRPGCVVWCMGGTQHTTGN 360
               ++  VA++TP  V  + G      EE   + A T   N+    ++ +G T HT G 
Sbjct: 360 VWNLLKKHVARYTPEMVTSLCGTPAKAYEEICQSLASTCVPNKTATFMYALGWTHHTNGA 419

Query: 361 NNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTE------- 413
              RA  +++L LGNIG +GGG N  RGH N+QG TDLG+LS  LPGY  L         
Sbjct: 420 QIIRAAAMIQLLLGNIGMAGGGINALRGHSNIQGYTDLGLLSLNLPGYMPLPSEKQGDLK 479

Query: 414 ----------------GSWKH--------WASVWGVDFEWIKNRFDQGTYNGALPMETPG 449
                             WK+          S WG D     N +        LP     
Sbjct: 480 TYLGQITPDALLADQVNYWKNTPKFFISMMKSFWG-DHAQAANNWGYDW----LPKWDRS 534

Query: 450 IPVSRWIDGVLENKDN--LQQRENIRAMFYWGHAVNSQTRGVEMKKAMQKLDMMVIVDPY 507
             V    + +L+ K N  + Q  N  A F         +   +   A+ KL  MV++DP 
Sbjct: 535 YDVMAQTELMLDGKMNGYIVQGFNPLAAF---------SNKNKATAALSKLKYMVVIDPL 585

Query: 508 PTVAAV-------MNDRTDG-----VYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFE 555
            T  +         ND         V+ LP++   E  GS+  S R +QW     EP  E
Sbjct: 586 ATETSTFWQNHGEFNDVNSAEIQTEVFRLPSSCFAEENGSIANSGRWLQWHWAAAEPPAE 645

Query: 556 SKPDHEIMYLLSQKL--------GIADQLCKHIR---VENNQPLIEDITREFN 597
           +  D +I+  L  +L        G+  +   +I     +   P  E+I RE N
Sbjct: 646 ALHDAKILGRLMTRLRELYREEGGVCPEPVLNINWNYQDPEDPTQEEIAREAN 698



 Score = 47.4 bits (111), Expect = 5e-09
 Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 770  PLHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVE-YE 828
            P H EP+ TP    +   P               +  +   K+ ++P + T+  + E + 
Sbjct: 847  PEHYEPIETP----IGTNPLHPAVVSNPAARLFARDAKTMGKASDFPYVATTYSITELFR 902

Query: 829  GGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVK 888
               +  R N   A +Q E FVE+    A   G   GDMV V   ++G IK KA+VT+R+K
Sbjct: 903  HWTKHARLN---AIVQPEQFVEIGENLAKSKGIQAGDMVKV-SCQRGYIKAKAVVTKRIK 958

Query: 889  ----PGMAF----LPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQE 940
                 G A     +P H+G  F+G   +            G  ANT T    D  +   E
Sbjct: 959  TLTVAGKAIETVGIPCHWG--FEGATRK------------GFLANTLTPSVGDANSQTPE 1004

Query: 941  TKVTLCNIRK 950
             K  L N+ K
Sbjct: 1005 YKAFLVNVEK 1014