Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1016 a.a., formate dehydrogenase-N subunit alpha from Dickeya dadantii 3937

 Score =  238 bits (606), Expect = 2e-66
 Identities = 202/701 (28%), Positives = 312/701 (44%), Gaps = 127/701 (18%)

Query: 19  ISRRAFMKNTSLAAGGAAVGASLFTPGM-IRKAQASEVDRSAKTEVKRTICSHCSVGCGI 77
           +SRR F K  +    G  V A  F+P   + + +  ++ R+ +T   R  C++CSVGCGI
Sbjct: 3   VSRRQFFKICAGGMAGTTVTALGFSPSAALAETRQYKLLRARET---RNNCTYCSVGCGI 59

Query: 78  YA-EVQNGVWTGQEPAF------DHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG-- 128
               + +G        +      DHP + G  C KGA L +  H ++RLKYP     G  
Sbjct: 60  LMYSLGDGAKNATASIYHIEGDPDHPVSRGSLCPKGAGLVDFIHSDQRLKYPEYRAPGSD 119

Query: 129 KWKKISWEQAINEIGDKALKIREESGPD------------SVYFLGSAKHSNEQAYLFRK 176
           KW +ISWE+A + I     K R+ +  +            +   L S+  SNE   L +K
Sbjct: 120 KWHRISWEEAFDRIARLMKKDRDANFVEKNAAGVTVNRWLTTGMLCSSAASNETGILDQK 179

Query: 177 MASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPV 236
                G   +D QAR+CH  TV+ +A T+G GAMTN++ D+ N   +L +G NPAEAHPV
Sbjct: 180 FVRALGMIGIDTQARLCHGPTVSALAPTFGRGAMTNNWVDIKNANVILVMGGNPAEAHPV 239

Query: 237 AMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDK 296
             +  + AK KN  K++V DPR  R+AA AD +  +R GSD+ F+ GV+ ++  ++    
Sbjct: 240 GFKWAVEAKVKNGAKLIVVDPRFNRSAAVADMYSPIRAGSDITFLLGVVNYLLSHDKVQM 299

Query: 297 EYIR----------------QRVF-GMDE------------------------------- 308
            Y++                + +F G DE                               
Sbjct: 300 PYVKAYTNASLIVRDDYHFDEGIFSGYDEKERKYDRTSWQYELDENGFAKRDDTLRHPRC 359

Query: 309 ----IRAEVAKWTPAEVERVTGVSEEEVYN----TAKTLAENRPGCVVWCMGGTQHTTGN 360
               ++  V+++TP  V  V G  + +        A T   +R   +++ +G TQHT+G 
Sbjct: 360 VWNLLKEHVSRYTPDLVTNVCGTPKSDFLTICDLLASTSVPDRTATIMYALGWTQHTSGA 419

Query: 361 NNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKHWA 420
              R   +++L LGN+G +GGG N  RGH N+QG TDLG+LS  LPGY  L   S K  +
Sbjct: 420 QMIRTAAMIQLLLGNVGMAGGGVNALRGHSNIQGYTDLGLLSLNLPGYMPLP--SEKQTS 477

Query: 421 SVWGVDFEWIKNRF-DQGTYNGALPMETPGIPVSRWIDGVLENKD-----NLQQRENIRA 474
               +D    K    DQ  Y    P     +  S W D   +  D       +  ++  A
Sbjct: 478 LTMYLDQITPKALLADQVNYWKNTPKFFISMMKSFWGDKAQKENDWGYDWLPKWDKSYDA 537

Query: 475 MFYWGHAVNSQTRGV---------------EMKKAMQKLDMMVIVDPYPTVAA------- 512
           + Y    +  +  G                  + A++KL  +VI+DP  T  +       
Sbjct: 538 LAYSRMMLEGKVNGYIVQGFNPIAAFADSNRARDALKKLKYLVIIDPLATETSNFWQNHG 597

Query: 513 VMNDRTDG-----VYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIM---- 563
            +ND         V+ LP++   E  GS+  S R +QW  Q  EP  E++ D  I+    
Sbjct: 598 ELNDVDSSQIQTEVFRLPSSCFAEENGSIVNSGRWLQWHYQGAEPPGEARHDGVILAGLF 657

Query: 564 ----YLLSQKLGIADQLCKHIR---VENNQPLIEDITREFN 597
                L +++ G   +   ++    +E   P  E+IT+E N
Sbjct: 658 LRLRELYAKEGGANPEPVLNMSWSYLEPEDPSAEEITKEAN 698



 Score = 42.7 bits (99), Expect = 1e-07
 Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 31/191 (16%)

Query: 770  PLHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVE-YE 828
            P H EPL +P    L + P +           L           E+P + T+  + E + 
Sbjct: 848  PAHYEPLESP----LKNNPVYSKAQVNPAARILPADRPYMGTVDEFPFVATTYSITELFR 903

Query: 829  GGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRV- 887
               +  R N   A +Q E FVE+    A   G   GD+V V  +++G IK KA+VT+R+ 
Sbjct: 904  HWTKHARLN---AIVQPEQFVEIGEGLAKQKGIQAGDVVKV-SSKRGYIKAKAVVTKRIR 959

Query: 888  ------KPGMAF-LPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQE 940
                  KP     +P H+G  F+G   +            G  AN  T +  D  +   E
Sbjct: 960  TLTIQGKPVETIGVPCHWG--FEGTTQK------------GFMANILTPHVGDANSQTPE 1005

Query: 941  TKVTLCNIRKA 951
             K  L N+ KA
Sbjct: 1006 YKAFLVNVEKA 1016